RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FAM234BA2RU67 622 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 STX7O15400 261 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 GJB3O75712 270 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 CD1DP15813 335 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 MATKP42679 507 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 CASP9P55211 416 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 RPL38P63173 70 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 VLDLRP98155 873 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 LRRC32Q14392 662 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ZBTB37Q5TC79 503 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 FRMPD2BQ6IN97 320 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ANKRD54Q6NXT1 300 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 NXF2Q9GZY0 626 aaKnown RBP14.76□□□□□ -0.05
CIRBP-228ENST00000590347 ANKHQ9HCJ1 492 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 CYB5R1Q9UHQ9 305 aa14.76□□□□□ -0.05
CIRBP-228ENST00000590347 PHIPQ8WWQ0 1821 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TEX51A0A1B0GUA7 166 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 UPK3BL1B0FP48 263 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 UPK3BL2E5RIL1 263 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TLR5O60602 858 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TOXO94900 526 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 SLC2A4P14672 509 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 EPHA5P54756 1037 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 B2MP61769 119 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ABATP80404 500 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 HMGCS1Q01581 520 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 CAPN13Q6MZZ7 669 aaPredicted RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 METTL2BQ6P1Q9 378 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 FAM171BQ6P995 826 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 Q6ZSR9 355 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 PLCZ1Q86YW0 608 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ASB12Q8WXK4 309 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 DPF3Q92784 378 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TRMOQ9BU70 441 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TMEM134Q9H6X4 195 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 SARS2Q9NP81 518 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 CCDC59Q9P031 241 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF222Q9UK12 451 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 NPEPPSL1A6NEC2 478 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 FABP12A6NFH5 140 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 GTPBP1O00178 669 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ALAS2P22557 587 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TIE1P35590 1138 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 RPL6Q02878 288 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 PAFAH1B3Q15102 231 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 AANATQ16613 207 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 UAP1L1Q3KQV9 507 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 PKDCCQ504Y2 493 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 KIAA1614Q5VZ46 1190 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 RASAL3Q86YV0 1011 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 MSRB3Q8IXL7 192 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 RNF34Q969K3 372 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 MTFMTQ96DP5 389 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 FAM120BQ96EK7 910 aaKnown RBP14.75□□□□□ -0.05
CIRBP-228ENST00000590347 L3HYPDHQ96EM0 354 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 TMEM209Q96SK2 561 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 UQCC2Q9BRT2 126 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 CCDC32Q9BV29 185 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 NRBP2Q9NSY0 501 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 DDIT4Q9NX09 232 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 MGAT4AQ9UM21 535 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 LGALS8O00214 317 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 RFXAPO00287 272 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF286BP0CG31 522 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF30P17039 623 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 KCNQ1P51787 676 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 NPRL3Q12980 569 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 LCP2Q13094 533 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 LINC00469Q8N7U9 141 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 SLC37A3Q8NCC5 494 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ATP6V1C2Q8NEY4 427 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 FBLIM1Q8WUP2 373 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ST8SIA4Q92187 359 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 ABHD16BQ9H3Z7 469 aa14.75□□□□□ -0.05
CIRBP-228ENST00000590347 NINQ8N4C6 2090 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 A0A0G2JLL6 359 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 POM121CA8CG34 1229 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 PLATP00750 562 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ADRA1BP35368 520 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 TEKQ02763 1124 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ELP6Q0PNE2 266 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 SLC14A1Q13336 389 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 MAPKAPK3Q16644 382 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 WSCD2Q2TBF2 565 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 SLC25A52Q3SY17 297 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF549Q6P9A3 640 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 CREB3L2Q70SY1 520 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 PRRT2Q7Z6L0 340 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 UPRTQ96BW1 309 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 LINC00052Q96N35 136 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 DPH2Q9BQC3 489 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 RDH8Q9NYR8 311 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 NDRG4Q9ULP0 352 aaKnown RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 NDRG2Q9UN36 371 aaKnown RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 PCDHGA6Q9Y5G7 932 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 PPP2R3BQ9Y5P8 575 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 AP2A2O94973 939 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 LRATO95237 230 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms