RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 USP1O94782 785 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 IPO13O94829 963 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 KLHL18O94889 574 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 SLC16A8O95907 504 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 ZGLP1P0C6A0 271 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 CMPK1P30085 196 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 MAGEA3P43357 314 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 EFNA3P52797 238 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 DHX34Q14147 1143 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 RBBP7Q16576 425 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 TUBB8Q3ZCM7 444 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 ATG9BQ674R7 924 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 CYHR1Q6ZMK1 362 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 LRRC56Q8IYG6 542 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 RAB42Q8N4Z0 105 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF480Q8WV37 535 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 OR2A5Q96R48 311 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 WDR77Q9BQA1 342 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 CRB3Q9BUF7 120 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 MRPS30Q9NP92 439 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 SEMA3GQ9NS98 782 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 CUEDC1Q9NWM3 386 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 TAC3Q9UHF0 121 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 NXT1Q9UKK6 140 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 NOVA2Q9UNW9 492 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 RUVBL1Q9Y265 456 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 MRFAP1Q9Y605 127 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 COPG1Q9Y678 874 aaKnown RBP17.16■□□□□ 0.34
H3F3B-209ENST00000589949 IGLV3-12A0A075B6K2 115 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 WIPF3A6NGB9 483 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 SDR42E2A6NKP2 422 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 E7ENX8 843 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 KIF5CO60282 957 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 VARSP26640 1264 aaKnown RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 RPA3P35244 121 aaPredicted RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 COILP38432 576 aaPredicted RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 GLRBP48167 497 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 PNLIPRP1P54315 467 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 TAP2Q03519 686 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 PRDX1Q06830 199 aaKnown RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 TSTA3Q13630 321 aaPredicted RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 PRMT9Q6P2P2 845 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 AMER3Q8N944 861 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 MCUQ8NE86 351 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 ASB11Q8WXH4 323 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 THOC3Q96J01 351 aaKnown RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 INTS10Q9NVR2 710 aaKnown RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF282Q9UDV7 671 aaPredicted RBP17.15■□□□□ 0.34
H3F3B-209ENST00000589949 C3orf18Q9UK00 162 aa17.15■□□□□ 0.34
H3F3B-209ENST00000589949 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 E5RI56 91 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 GFYI3L273 518 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 P2RX6O15547 441 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 FOXS1O43638 330 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CLDN1O95832 211 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 LDLRP01130 860 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 MLNP12872 115 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 SLC1A2P43004 574 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 MPP1Q00013 466 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 TIAL1Q01085 375 aaKnown RBP eCLIP17.14■□□□□ 0.332e-8■□□□□ 9.1
H3F3B-209ENST00000589949 ARHGAP19Q14CB8 494 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CYP1B1Q16678 543 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 MUM1Q2TAK8 710 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 AGAP7PQ5VUJ5 663 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 ICE2Q659A1 982 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 PLD3Q8IV08 490 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CSNK1A1LQ8N752 337 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CATSPER1Q8NEC5 780 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 PPP4R1Q8TF05 950 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 COG1Q8WTW3 980 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 PSMF1Q92530 271 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 TM9SF4Q92544 642 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 MIEF2Q96C03 454 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CABS1Q96KC9 395 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 SIGLEC10Q96LC7 697 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 AGAP4Q96P64 663 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 LHPPQ9H008 270 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 ZNF160Q9HCG1 818 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 SAMD15Q9P1V8 674 aa17.14■□□□□ 0.33
H3F3B-209ENST00000589949 MRPS2Q9Y399 296 aaKnown RBP17.14■□□□□ 0.33
H3F3B-209ENST00000589949 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 ANKUB1A6NFN9 424 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 PFDN6O15212 129 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 KLHL41O60662 606 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 HAUS5O94927 633 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 STATHP02808 62 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
H3F3B-209ENST00000589949 CELA2AP08217 269 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 PAMP19021 973 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 FBLP22087 321 aaKnown RBP17.13■□□□□ 0.33
H3F3B-209ENST00000589949 COL8A1P27658 744 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 SARNPP82979 210 aaKnown RBP17.13■□□□□ 0.33
H3F3B-209ENST00000589949 OCA2Q04671 838 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 SYT16Q17RD7 645 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 ARMC3Q5W041 872 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms