RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 VPS26AO75436 327 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 CCNDBP1O95273 360 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 EIF2S1P05198 315 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 ZGLP1P0C6A0 271 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 MPC1LP0DKB6 136 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ENO3P13929 434 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 COILP38432 576 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 MAGEA3P43357 314 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 PNLIPRP1P54315 467 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ABATP80404 500 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 TAP2Q03519 686 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 KLC1Q07866 573 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 MRPL49Q13405 166 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 THOC5Q13769 683 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 TUBB8Q3ZCM7 444 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 GARNL3Q5VVW2 1013 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ICE2Q659A1 982 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ATG9BQ674R7 924 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ZNF470Q6ECI4 717 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 SUSD1Q6UWL2 747 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 CYHR1Q6ZMK1 362 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 CUZD1Q86UP6 607 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 METTL27Q8N6F8 245 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 PPP4R1Q8TF05 950 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ZNF480Q8WV37 535 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ASB11Q8WXH4 323 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 INPP5DQ92835 1189 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ZNF669Q96BR6 464 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 MIEF2Q96C03 454 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 SERPINB12Q96P63 405 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 OR2A5Q96R48 311 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 LMF1Q96S06 567 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 PKP4Q99569 1192 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 TRIM56Q9BRZ2 755 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 CRB3Q9BUF7 120 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 ACAT2Q9BWD1 397 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 LHPPQ9H008 270 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 PLEKHB1Q9UF11 243 aaPredicted RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 DHRS7Q9Y394 339 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 COPG1Q9Y678 874 aaKnown RBP11.65□□□□□ -0.54
VAT1-206ENST00000589709 MAU2Q9Y6X3 613 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 PCM1Q15154 2024 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 CNTRLQ7Z7A1 2325 aa11.65□□□□□ -0.54
VAT1-206ENST00000589709 IGKV1-8A0A0C4DH67 115 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 WIPF3A6NGB9 483 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 EIF3FO00303 357 aaPredicted RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 TXNDC9O14530 226 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 PCDH17O14917 1159 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 PRPF4O43172 522 aaKnown RBP eCLIP11.64□□□□□ -0.55
VAT1-206ENST00000589709 SLC16A8O95907 504 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 HPP00738 406 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 EZRP15311 586 aaKnown RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 SKIV2L2P42285 1042 aaKnown RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 TERF1P54274 439 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 CTBP1Q13363 440 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 DSG2Q14126 1118 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 KCTD19Q17RG1 926 aaPredicted RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 ZNF549Q6P9A3 640 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 SHISA6Q6ZSJ9 500 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 DENND6AQ8IWF6 608 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 LRRC56Q8IYG6 542 aaPredicted RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 CSNK1A1LQ8N752 337 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 PRR7Q8TB68 274 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 CALML6Q8TD86 181 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 SIGLEC10Q96LC7 697 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 SLC30A3Q99726 388 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 CCDC68Q9H2F9 335 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
VAT1-206ENST00000589709 C3orf18Q9UK00 162 aa11.64□□□□□ -0.55
VAT1-206ENST00000589709 POLEQ07864 2286 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 DOCK10Q96BY6 2186 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 ESPNB1AK53 854 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 SMAPO00193 183 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 MAP2K7O14733 419 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 ZBTB14O43829 449 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 KIF5CO60282 957 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 ACPPP15309 386 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 FBLP22087 321 aaKnown RBP11.63□□□□□ -0.55
VAT1-206ENST00000589709 HRH2P25021 359 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 SLC26A3P40879 764 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 TSFMP43897 325 aaKnown RBP11.63□□□□□ -0.55
VAT1-206ENST00000589709 GLRBP48167 497 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 Q0VFX4 171 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 NR6A1Q15406 480 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 LONRF1Q17RB8 773 aa11.63□□□□□ -0.55
VAT1-206ENST00000589709 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms