RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 H0YGG7 62 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 H3BMM5 538 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 PFDN6O15212 129 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 WFS1O76024 890 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 IFNB1P01574 187 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 EIF2S1P05198 315 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 APRTP07741 180 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 CYC1P08574 325 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 PKMP14618 531 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 PSMB5P28074 263 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 HSD17B2P37059 387 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 SLC26A3P40879 764 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 NPY2RP49146 381 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 ADARP55265 1226 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 ARF3P61204 181 aaPredicted RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 GBX1Q14549 363 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 CNSTQ6PJW8 725 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 GFRALQ6UXV0 394 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 C4orf22Q6V702 233 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 MCEMP1Q8IX19 187 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 ACRBPQ8NEB7 543 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 OR9A1PQ8NGU1 263 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 BRIX1Q8TDN6 353 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 SMPDL3AQ92484 453 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 CABS1Q96KC9 395 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 TCF12Q99081 682 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 DPH7Q9BTV6 452 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 CHST11Q9NPF2 352 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 EIF2B3Q9NR50 452 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 CHRAC1Q9NRG0 131 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 ABI3Q9P2A4 366 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 TRPC4Q9UBN4 977 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 SUCOQ9UBS9 1254 aaKnown RBP13.31□□□□□ -0.28
VMP1-209ENST00000588915 APCP25054 2843 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 MYO7BQ6PIF6 2116 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 PRF1P14222 555 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 PTGER4P35408 488 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 BDKRB1P46663 353 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 FAM53BQ14153 422 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 ANKRD20A4Q4UJ75 823 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 TMEM205Q6UW68 189 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 TMEM207Q6UWW9 146 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 DTWD1Q8N5C7 304 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 RNF10Q8N5U6 811 aaKnown RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 CCDC89Q8N998 374 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 SUN3Q8TAQ9 357 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 ATG4AQ8WYN0 398 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 MESP1Q9BRJ9 268 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 UNKQ9C0B0 810 aaKnown RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.3□□□□□ -0.28
VMP1-209ENST00000588915 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
VMP1-209ENST00000588915 MRPS30Q9NP92 439 aaKnown RBP13.3□□□□□ -0.28
VMP1-209ENST00000588915 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 CCNDBP1O95273 360 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 FTCDO95954 541 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 ESR1P03372 595 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 HEXBP07686 556 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 ANXA5P08758 320 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 PRDX1Q06830 199 aaKnown RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 ARMC3Q5W041 872 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 MRNIPQ6NTE8 343 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 PAQR7Q86WK9 346 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 BIRC8Q96P09 236 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 OR2A5Q96R48 311 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 TUBB6Q9BUF5 446 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 PLA2G3Q9NZ20 509 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 BFARQ9NZS9 450 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 RUVBL1Q9Y265 456 aaKnown RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 DRG1Q9Y295 367 aaKnown RBP13.29□□□□□ -0.28
VMP1-209ENST00000588915 PCDHGB6Q9Y5F9 930 aa13.29□□□□□ -0.28
VMP1-209ENST00000588915 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 MYO1CO00159 1063 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 NRP2O60462 931 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 PSIP1O75475 530 aaKnown RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 RASAL1O95294 804 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 WDPCPO95876 746 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 EZRP15311 586 aaKnown RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 CA7P43166 264 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 ZNF75DP51815 510 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 EIF3BP55884 814 aaKnown RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 KCNK10P57789 538 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 SESN2P58004 480 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms