RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FETUBQ9UGM5 382 aa19.38■□□□□ 0.69
DDX39A-207ENST00000588542 TRIM49D1C9J1S8 452 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 E7EQ34 232 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 EFSO43281 561 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 OR2B3O76000 313 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 ANXA5P08758 320 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 TFEBP19484 476 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 NAA25Q14CX7 972 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 C18orf21Q32NC0 220 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 ZC3H12BQ5HYM0 836 aaKnown RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 FRMPD2BQ6IN97 320 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 CAPN13Q6MZZ7 669 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 TAOK1Q7L7X3 1001 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 GPSM1Q86YR5 675 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 N4BP2L2Q92802 583 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 ALKBH8Q96BT7 664 aaKnown RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 RHBDF1Q96CC6 855 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 ALG9Q9H6U8 611 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 AKIRIN1Q9H9L7 192 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-207ENST00000588542 ENAMQ9NRM1 1142 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 TLK1Q9UKI8 766 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 SNX7Q9UNH6 387 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 LOC400499M0QZD8 3231 aa19.37■□□□□ 0.69
DDX39A-207ENST00000588542 CCDC88CQ9P219 2028 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 LOC101059948A0A1B0GTJ6 334 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 ZNF749O43361 778 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 CPNE3O75131 537 aaKnown RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 SHBGP04278 402 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 SNRPAP09012 282 aaKnown RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 STAT5AP42229 794 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 GCGRP47871 477 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 HNMTP50135 292 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 ATP1A2P50993 1020 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 ABHD18Q0P651 414 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 GPS2Q13227 327 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 PTCHD3Q3KNS1 767 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 TAF1BQ53T94 588 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 KLHDC8AQ8IYD2 350 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 GPR135Q8IZ08 494 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 ESX1Q8N693 406 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 AENQ8WTP8 325 aaKnown RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 UBLCP1Q8WVY7 318 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 CRELD1Q96HD1 420 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 GPR78Q96P69 363 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 CCNL2Q96S94 520 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-207ENST00000588542 ATOH8Q96SQ7 321 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 EGFL8Q99944 293 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 MGAQ8IWI9 3026 aa19.36■□□□□ 0.69
DDX39A-207ENST00000588542 LOC105369274A0A096LPK9 316 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 LOC102723532A0A0G2JNH3 316 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 A0A0J9YVX5 310 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 NCF1BA6NI72 391 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 NCF1CA8MVU1 366 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 H7BY64 318 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 TAPBPO15533 448 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 KLHL2O95198 593 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 MT-ND3P03897 115 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 NCF1P14598 390 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 WT1P19544 449 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 RORAP35398 523 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 SLC6A12P48065 614 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 RELAQ04206 551 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 CDKL4Q5MAI5 379 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 MANEAQ5SRI9 462 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 BROXQ5VW32 411 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 C19orf48Q6RUI8 117 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 C17orf64Q86WR6 236 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 OR4N4Q8N0Y3 316 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 PLD6Q8N2A8 252 aaKnown RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 IL22RA1Q8N6P7 574 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 STAG3L4Q8TBR4 150 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 LRFN5Q96NI6 719 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 PRAP1Q96NZ9 151 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 ZFYVE21Q9BQ24 234 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 SELENOSQ9BQE4 189 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 HAUS8Q9BT25 410 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 PARD6BQ9BYG5 372 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 VPS11Q9H270 941 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 ACTR5Q9H9F9 607 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-207ENST00000588542 PCMTD2Q9NV79 361 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 TMEM184CQ9NVA4 438 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 WDR70Q9NW82 654 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 RNF112Q9ULX5 631 aa19.35■□□□□ 0.69
DDX39A-207ENST00000588542 CACNA1BQ00975 2339 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 TERTO14746 1132 aaKnown RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 HAT1O14929 419 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 ZSCAN9O15535 394 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 SRPX2O60687 465 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 RFPL1O75677 317 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 KRT37O76014 449 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 CDH1P12830 882 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 LIFP15018 202 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 EZRP15311 586 aaKnown RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 HRH2P25021 359 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 GGT5P36269 586 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 HSD17B3P37058 310 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 VSX2P58304 361 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 CSNK1G2P78368 415 aa19.34■□□□□ 0.69
DDX39A-207ENST00000588542 COL9A2Q14055 689 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-207ENST00000588542 NAA30Q147X3 362 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms