RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TSTA3Q13630 321 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 ARHGAP19Q14CB8 494 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 HIF1AQ16665 826 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 HIST2H2BCQ6DN03 193 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PRMT9Q6P2P2 845 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PAQR7Q86WK9 346 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 REXO1L1PQ8IX06 675 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PRSS58Q8IYP2 241 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 AGGF1Q8N302 714 aaeCLIP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 RASGEF1CQ8N431 466 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PPFIBP2Q8ND30 876 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 OR11G2Q8NGC1 345 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PRR7Q8TB68 274 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 STT3BQ8TCJ2 826 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 SMPDL3AQ92484 453 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 MAGOHBQ96A72 148 aaKnown RBP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PKP4Q99569 1192 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PLCD4Q9BRC7 762 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 XAB2Q9HCS7 855 aaKnown RBP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 TAC3Q9UHF0 121 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 NTNG1Q9Y2I2 539 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 NEU2Q9Y3R4 380 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 PCDHGA10Q9Y5H3 936 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 ZCWPW2A0A1B0GU75 182 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CTAGE9A4FU28 777 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 H0YGG7 62 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 KIF5CO60282 957 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 SLC16A8O95907 504 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 ZGLP1P0C6A0 271 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 FBLP22087 321 aaKnown RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 SLC1A2P43004 574 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 PNLIPRP1P54315 467 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 ARF3P61204 181 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CYP1B1Q16678 543 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 MUM1Q2TAK8 710 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 PRTGQ2VWP7 1150 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 TTLL9Q3SXZ7 439 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CRB2Q5IJ48 1285 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 ICE2Q659A1 982 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 FBXO42Q6P3S6 717 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 ZNF549Q6P9A3 640 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 NEK10Q6ZWH5 1172 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 PARP9Q8IXQ6 854 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 MCUQ8NE86 351 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 PPP4R1Q8TF05 950 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CABS1Q96KC9 395 aa17.9■□□□□ 0.46
TRIM47-205ENST00000587774 WDR77Q9BQA1 342 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 CUEDC1Q9NWM3 386 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 ZNF282Q9UDV7 671 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 PLEKHB1Q9UF11 243 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 RUVBL1Q9Y265 456 aaKnown RBP17.9■□□□□ 0.46
TRIM47-205ENST00000587774 SDR42E2A6NKP2 422 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 PHF2O75151 1096 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 VPS26AO75436 327 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 COILP38432 576 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-205ENST00000587774 MAGEA3P43357 314 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 OCA2Q04671 838 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 Q0VFX4 171 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 THOC5Q13769 683 aaKnown RBP17.89■□□□□ 0.45
TRIM47-205ENST00000587774 HKDC1Q2TB90 917 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 VWA2Q5GFL6 755 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 AGAP7PQ5VUJ5 663 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 IRAK1BP1Q5VVH5 260 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 ZNF425Q6IV72 752 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 IGFL2Q6UWQ7 119 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 CSNK1A1LQ8N752 337 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 ZNF480Q8WV37 535 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 KCNJ9Q92806 393 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 MIEF2Q96C03 454 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 AGAP4Q96P64 663 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 LHPPQ9H008 270 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 CCDC68Q9H2F9 335 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 NOVA2Q9UNW9 492 aaKnown RBP17.89■□□□□ 0.45
TRIM47-205ENST00000587774 JRKLQ9Y4A0 524 aa17.89■□□□□ 0.45
TRIM47-205ENST00000587774 IGLV3-12A0A075B6K2 115 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 MAGEB16A2A368 324 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 FFAR3O14843 346 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 GPR42O15529 346 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 CCNDBP1O95273 360 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 CBX6O95503 412 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 SYF2O95926 243 aaKnown RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 ACPPP15309 386 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 GLRBP48167 497 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 CARSP49589 748 aaKnown RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 EMP3P54852 163 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 MPP1Q00013 466 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 PRDX1Q06830 199 aaKnown RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 FBXO15Q8NCQ5 510 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 C8orf44Q96CB5 159 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 THOC3Q96J01 351 aaKnown RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 PBKQ96KB5 322 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 GPR21Q99679 349 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 ZNF160Q9HCG1 818 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 ABCF3Q9NUQ8 709 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 PCYOX1Q9UHG3 505 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 C3orf18Q9UK00 162 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 COPG1Q9Y678 874 aaKnown RBP17.88■□□□□ 0.45
TRIM47-205ENST00000587774 MAD1L1Q9Y6D9 718 aa17.88■□□□□ 0.45
TRIM47-205ENST00000587774 ZNF839A8K0R7 811 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms