RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GABARAPL3Q9BY60 117 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 MMP27Q9H306 513 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 DNAJC11Q9NVH1 559 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PDP1Q9P0J1 537 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-206ENST00000587730 PPT2Q9UMR5 302 aa18.05■□□□□ 0.48
DDX39A-206ENST00000587730 TAF4O00268 1085 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 MITFO75030 526 aaPredicted RBP18.04■□□□□ 0.48
DDX39A-206ENST00000587730 CLDN7O95471 211 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 MT-ND2P03891 347 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 EPORP19235 508 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 CSKP41240 450 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 PXNP49023 591 aaPredicted RBP18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ELP6Q0PNE2 266 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 GBX1Q14549 363 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 LDLRAP1Q5SW96 308 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 PLEKHS1Q5SXH7 462 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 LIPJQ5W064 366 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 NOXRED1Q6NXP6 359 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 KIAA1958Q8N8K9 716 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ATG16L2Q8NAA4 619 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ZFP90Q8TF47 636 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 MYDGFQ969H8 173 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 TSEN34Q9BSV6 310 aaKnown RBP18.04■□□□□ 0.48
DDX39A-206ENST00000587730 SP140LQ9H930 580 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 CPNE5Q9HCH3 593 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 PLCXD1Q9NUJ7 323 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ADPRHL2Q9NX46 363 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 VNN3Q9NY84 501 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 EVLQ9UI08 416 aaPredicted RBP18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ABCG2Q9UNQ0 655 aa18.04■□□□□ 0.48
DDX39A-206ENST00000587730 ZNF106Q9H2Y7 1883 aaKnown RBP18.04■□□□□ 0.48
DDX39A-206ENST00000587730 IGLV3-16A0A075B6K0 115 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 E9PQ18 207 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 GFRA2O00451 464 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 MYO1DO94832 1006 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 KCNK5O95279 499 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 GSNP06396 782 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
DDX39A-206ENST00000587730 JUPP14923 745 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 ENGP17813 658 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 TGM1P22735 817 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 CD6P30203 668 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 CDC20Q12834 499 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 ANKRD34AQ69YU3 496 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 PRSS55Q6UWB4 352 aaPredicted RBP18.03■□□□□ 0.48
DDX39A-206ENST00000587730 TPRG1Q6ZUI0 275 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 CEP68Q76N32 757 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 ZBTB46Q86UZ6 589 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 SYT12Q8IV01 421 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 VPS37AQ8NEZ2 397 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 NDNFQ8TB73 568 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 SLC38A4Q969I6 547 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 LGALS12Q96DT0 336 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 ITPAQ9BY32 194 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 OSGIN1Q9UJX0 560 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 GABRQQ9UN88 632 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 RUVBL1Q9Y265 456 aaKnown RBP18.03■□□□□ 0.48
DDX39A-206ENST00000587730 PCDHGB3Q9Y5G1 929 aa18.03■□□□□ 0.48
DDX39A-206ENST00000587730 A0A1W2PQ67 120 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 OR2A25A4D2G3 310 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 TMEM247A6NEH6 219 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ADAM23O75077 832 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 COQ9O75208 318 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 SEC24AO95486 1093 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ABCB1P08183 1280 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 SELPP16109 830 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 AOAHP28039 575 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 CCND3P30281 292 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 HALP42357 657 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 CDKN2CP42773 168 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ASMTP46597 345 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 SMAD3P84022 425 aaKnown RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 PPP1R8Q12972 351 aaKnown RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 NPRL3Q12980 569 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 KRR1Q13601 381 aaKnown RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ELOAQ14241 798 aaKnown RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 TEAD4Q15561 434 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 FBXO43Q4G163 708 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 PAGE2BQ5JRK9 111 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 USP45Q70EL2 814 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 FAM217AQ8IXS0 508 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 RHOXF1Q8NHV9 184 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ASB11Q8WXH4 323 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 EFHD2Q96C19 240 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 MTFMTQ96DP5 389 aaKnown RBP18.02■□□□□ 0.48
DDX39A-206ENST00000587730 ZHX1-C8orf76Q96EF9 292 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 HRASLS5Q96KN8 279 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 DACH2Q96NX9 599 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 SIGLEC11Q96RL6 698 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 UGT2A1Q9Y4X1 527 aa18.02■□□□□ 0.48
DDX39A-206ENST00000587730 BMP1P13497 986 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 OR1D2P34982 312 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 MASP1P48740 699 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 EIF2B2P49770 351 aaKnown RBP18.02■□□□□ 0.47
DDX39A-206ENST00000587730 CAP1Q01518 475 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 IL1RL1Q01638 556 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 TBCEQ15813 527 aaPredicted RBP18.02■□□□□ 0.47
DDX39A-206ENST00000587730 MPP7Q5T2T1 576 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 ANXA8L1Q5VT79 327 aa18.02■□□□□ 0.47
DDX39A-206ENST00000587730 OR4F3Q6IEY1 312 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms