RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MVB12AQ96EY5 273 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 CABS1Q96KC9 395 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 DPH7Q9BTV6 452 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 SPATA7Q9P0W8 599 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 ZNF148Q9UQR1 794 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 RUVBL2Q9Y230 463 aaKnown RBP13.38□□□□□ -0.27
DNMT1-213ENST00000587604 MRPS2Q9Y399 296 aaKnown RBP13.38□□□□□ -0.27
DNMT1-213ENST00000587604 F8P00451 2351 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 IGHV1-45A0A0A0MS14 117 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 KRT87PA6NCN2 255 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
DNMT1-213ENST00000587604 PHF2O75151 1096 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 NDUFS3O75489 264 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 WFS1O76024 890 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 MATN4O95460 622 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
DNMT1-213ENST00000587604 KIF5AQ12840 1032 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 DSG2Q14126 1118 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 FASTKQ14296 549 aaKnown RBP13.37□□□□□ -0.27
DNMT1-213ENST00000587604 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 SIRT6Q8N6T7 355 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 TGIF2Q9GZN2 237 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
DNMT1-213ENST00000587604 TREX1Q9NSU2 369 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 C14orf105Q9NVL8 296 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 RIC8BQ9NVN3 520 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-213ENST00000587604 PDZD2O15018 2839 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 CCDC168Q8NDH2 2452 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
DNMT1-213ENST00000587604 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 VPS26AO75436 327 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 CRYABP02511 175 aaKnown RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 HEXBP07686 556 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 MYBL2P10244 700 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ERGP11308 486 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ICAM2P13598 275 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ETS1P14921 441 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 POU3F2P20265 443 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 SLC26A3P40879 764 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 SESN2P58004 480 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 AP2B1P63010 937 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 GARNL3Q5VVW2 1013 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 PRUNE1Q86TP1 453 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 DNAJB8Q8NHS0 232 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 SMPDL3AQ92484 453 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 BIRC8Q96P09 236 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 PLCD4Q9BRC7 762 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ACAT2Q9BWD1 397 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 RNF32Q9H0A6 362 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 MRPS30Q9NP92 439 aaKnown RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 PAK5Q9P286 719 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 ABI3Q9P2A4 366 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 SUCOQ9UBS9 1254 aaKnown RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 RUVBL1Q9Y265 456 aaKnown RBP13.36□□□□□ -0.27
DNMT1-213ENST00000587604 CSMD2Q7Z408 3487 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 GTF3C1Q12789 2109 aa13.36□□□□□ -0.27
DNMT1-213ENST00000587604 RASAL1O95294 804 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 WDPCPO95876 746 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 UQCRHP07919 91 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ANXA5P08758 320 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 PKMP14618 531 aaKnown RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ATP5DP30049 168 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 NPY2RP49146 381 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 CRADDP78560 199 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 RELAQ04206 551 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 EEF1A2Q05639 463 aaKnown RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 GBX1Q14549 363 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ARHGAP19Q14CB8 494 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ANKRD20A4Q4UJ75 823 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 CTSL3PQ5NE16 218 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 MTFR2Q6P444 385 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 PAQR7Q86WK9 346 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 SLC13A5Q86YT5 568 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 CSNK1A1LQ8N752 337 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 AMER3Q8N944 861 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 C1orf54Q8WWF1 131 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 OR2A5Q96R48 311 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 IL22Q9GZX6 179 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 ZNF700Q9H0M5 742 aa13.35□□□□□ -0.27
DNMT1-213ENST00000587604 EIF2B3Q9NR50 452 aaKnown RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 UTP6Q9NYH9 597 aaKnown RBP13.35□□□□□ -0.27
DNMT1-213ENST00000587604 TACC2O95359 2948 aa13.34□□□□□ -0.27
DNMT1-213ENST00000587604 FBN2P35556 2912 aa13.34□□□□□ -0.27
DNMT1-213ENST00000587604 TRGV8A0A0C4DH27 118 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms