RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PIK3R1P27986 724 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PRDX3P30048 256 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 PKLRP30613 574 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 HOXA6P31267 233 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CNR2P34972 360 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 RPL3P39023 403 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 NUDT2P50583 147 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CLNS1AP54105 237 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 FOXA1P55317 472 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ABATP80404 500 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TAP2Q03519 686 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TGM3Q08188 693 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 GRIK2Q13002 908 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 KLF10Q13118 480 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 FZD5Q13467 585 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 DOC2AQ14183 400 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 SLBPQ14493 270 aaKnown RBP eCLIP5.98□□□□□ -1.45
LIG3-206ENST00000586058 RBBP5Q15291 538 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 TCEA2Q15560 299 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 SF1Q15637 639 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 RPE65Q16518 533 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 DPY19L1Q2PZI1 675 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 AP5B1Q2VPB7 878 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PDCD4Q53EL6 469 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 AGKQ53H12 422 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PRRT3Q5FWE3 981 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 XKR7Q5GH72 579 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ICE2Q659A1 982 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CWF19L1Q69YN2 538 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 DUS1LQ6P1R4 473 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 SUSD1Q6UWL2 747 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ABRAXAS1Q6UWZ7 409 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 LARP4Q71RC2 724 aaKnown RBP eCLIP5.98□□□□□ -1.45
LIG3-206ENST00000586058 PAGE2Q7Z2X7 111 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 MAVSQ7Z434 540 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 WDR5BQ86VZ2 330 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 AMIGO1Q86WK6 493 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 RASGRP3Q8IV61 690 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TMEFF1Q8IYR6 380 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 SLC22A18ASQ8N1D0 253 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CPSF7Q8N684 471 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 DEFB119Q8N690 84 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 GLB1L3Q8NCI6 653 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 OR52E1Q8NGJ3 308 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 LMX1AQ8TE12 382 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ZDHHC1Q8WTX9 485 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 NEIL2Q969S2 332 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CMTM7Q96FZ5 175 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 METTL2AQ96IZ6 378 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 MARK4Q96L34 752 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 INSM2Q96T92 566 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 BTBD10Q9BSF8 475 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 C1orf50Q9BV19 199 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CCDC106Q9BWC9 280 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ACAT2Q9BWD1 397 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 SGPP1Q9BX95 441 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 DUSP15Q9H1R2 295 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 LRMDAQ9H2I8 198 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 MMADHCQ9H3L0 296 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 AKTIPQ9H8T0 292 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 EFCAB1Q9HAE3 211 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TM9SF3Q9HD45 589 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PRDM8Q9NQV8 689 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PRMT8Q9NR22 394 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 TMEM45AQ9NWC5 275 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 GID8Q9NWU2 228 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 C1orf109Q9NX04 203 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 OR6C2Q9NZP2 312 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CCDC167Q9P0B6 97 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TAAR2Q9P1P5 351 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ANKMY1Q9P2S6 941 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 GULP1Q9UBP9 304 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PCOLCE2Q9UKZ9 415 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PLAGL1Q9UM63 463 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 RUVBL1Q9Y265 456 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 INVSQ9Y283 1065 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 RNF11Q9Y3C5 154 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ASB1Q9Y576 335 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 COPG1Q9Y678 874 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 LAMA3Q16787 3333 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 A0A088AWK7 358 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 C15orf38-AP3S2A0A0A6YYH1 394 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 GNG14A0A1W2PPG7 69 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SERTM1A2A2V5 107 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 TMEM221A6NGB7 291 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 URADA6NGE7 173 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CCDC154A6NI56 674 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 B2RBV5 119 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 K7ESF4 209 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 M0R296 226 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 LSM1O15116 133 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 VILLO15195 856 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CFLARO15519 480 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 AQP9O43315 295 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 DFNA5O60443 496 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SLC22A3O75751 556 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 CSF2P04141 144 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 SNRPB2P08579 225 aaKnown RBP5.97□□□□□ -1.45
LIG3-206ENST00000586058 CDH1P12830 882 aa5.97□□□□□ -1.45
LIG3-206ENST00000586058 ACPPP15309 386 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms