RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 ITLN2Q8WWU7 325 aaPredicted RBP13.76□□□□□ -0.21
SDF2-202ENST00000585428 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 FRMD8P1Q9BZ68 369 aaPredicted RBP13.76□□□□□ -0.21
SDF2-202ENST00000585428 ZNF700Q9H0M5 742 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 ZNF148Q9UQR1 794 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 RUVBL2Q9Y230 463 aaKnown RBP13.76□□□□□ -0.21
SDF2-202ENST00000585428 MRPS2Q9Y399 296 aaKnown RBP13.76□□□□□ -0.21
SDF2-202ENST00000585428 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 FOXS1O43638 330 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 NDUFS3O75489 264 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 WDPCPO95876 746 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 APRTP07741 180 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 ICAM2P13598 275 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 FBLP22087 321 aaKnown RBP13.75□□□□□ -0.21
SDF2-202ENST00000585428 CXCR2P25025 360 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 MST1P26927 711 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 GRNP28799 593 aaKnown RBP13.75□□□□□ -0.21
SDF2-202ENST00000585428 CMPK1P30085 196 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 RELAQ04206 551 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 NAA25Q14CX7 972 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 CTSL3PQ5NE16 218 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 TMEM205Q6UW68 189 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 PAQR7Q86WK9 346 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 AMER2Q8N7J2 671 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 PPHLN1Q8NEY8 458 aaKnown RBP13.75□□□□□ -0.21
SDF2-202ENST00000585428 OR9A1PQ8NGU1 263 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
SDF2-202ENST00000585428 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 FOPNLQ96NB1 174 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 RUBCNLQ9H714 662 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 STMN3Q9NZ72 180 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 SPATA7Q9P0W8 599 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 ABI3Q9P2A4 366 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 TRPC4Q9UBN4 977 aa13.75□□□□□ -0.21
SDF2-202ENST00000585428 SNRNP200O75643 2136 aaKnown RBP13.75□□□□□ -0.21
SDF2-202ENST00000585428 PDZD2O15018 2839 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 PHF2O75151 1096 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 WFS1O76024 890 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 WISP2O76076 250 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 CELA2AP08217 269 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ZSCAN5DPP0CG00 497 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ARNTP27540 789 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 NMBRP28336 390 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ATP5DP30049 168 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 NPY2RP49146 381 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 EFNA3P52797 238 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 CRADDP78560 199 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 HKDC1Q2TB90 917 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 GARNL3Q5VVW2 1013 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 ZNF425Q6IV72 752 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 CNSTQ6PJW8 725 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 SUSD1Q6UWL2 747 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 TMEM207Q6UWW9 146 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 C1orf54Q8WWF1 131 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 SMPDL3AQ92484 453 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 MOCOSQ96EN8 888 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 CABS1Q96KC9 395 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 MAGEB10Q96LZ2 347 aaPredicted RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 ACAT2Q9BWD1 397 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 MRPS30Q9NP92 439 aaKnown RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 MKKSQ9NPJ1 570 aaPredicted RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 C14orf105Q9NVL8 296 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 PAK5Q9P286 719 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 GALPQ9UBC7 116 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 RUVBL1Q9Y265 456 aaKnown RBP13.74□□□□□ -0.21
SDF2-202ENST00000585428 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
SDF2-202ENST00000585428 MYO1CO00159 1063 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 FFAR3O14843 346 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 GPR42O15529 346 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 PRPF4O43172 522 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 23.9
SDF2-202ENST00000585428 PSIP1O75475 530 aaKnown RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 UNC5CO95185 931 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 RASAL1O95294 804 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 F10P00742 488 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 HEXBP07686 556 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 ERVK-10P10266 1014 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 ITGAMP11215 1152 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 FMO4P31512 558 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 ZNF75DP51815 510 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 SESN2P58004 480 aaPredicted RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 FAM53BQ14153 422 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms