RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CCSMST1Q4G0I0 132 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 LRRC8BQ6P9F7 803 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 FAM180AQ6UWF9 173 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 RIPOR1Q6ZS17 1223 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 BCORP1Q8N888 145 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 SLX1AQ9BQ83 275 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 PLCD4Q9BRC7 762 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 DPH7Q9BTV6 452 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 C14orf105Q9NVL8 296 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 KLHL42Q9P2K6 505 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 NSG1A0A0A6YYJ2 146 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 H0YGG7 62 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 MYO1CO00159 1063 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 PSIP1O75475 530 aaKnown RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 CCNDBP1O95273 360 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 BMP10O95393 424 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 MED26O95402 600 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 EIF2S1P05198 315 aaKnown RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 SERPINA7P05543 415 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 ZSCAN5DPP0CG00 497 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 PRR35P0CG20 571 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 MYBL2P10244 700 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 ARNTP27540 789 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 SLC26A3P40879 764 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 BDKRB1P46663 353 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 EMP2P54851 167 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 ARF3P61204 181 aaPredicted RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 CRADDP78560 199 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 RPS6KA1Q15418 735 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 SIX1Q15475 284 aaPredicted RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 ZRSR2Q15696 482 aaKnown RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 CTSL3PQ5NE16 218 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 MEI1Q5TIA1 1274 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 ZNF324BQ6AW86 544 aaPredicted RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 CNSTQ6PJW8 725 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 NEK10Q6ZWH5 1172 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 PRUNE1Q86TP1 453 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 FBXO15Q8NCQ5 510 aaPredicted RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 OR1N1Q8NGS0 311 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 LPGAT1Q92604 370 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 CABS1Q96KC9 395 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 CNDP1Q96KN2 507 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 ZNF160Q9HCG1 818 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 MKKSQ9NPJ1 570 aaPredicted RBP14.29□□□□□ -0.12
VAPA-209ENST00000585042 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 SOX13Q9UN79 622 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 OSGIN2Q9Y236 505 aa14.29□□□□□ -0.12
VAPA-209ENST00000585042 LOC102723996A0A087X1L8 192 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 TRAV17A0A0B4J275 112 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 MAGEB16A2A368 324 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 IDSB3KWA1 339 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 CATP04040 527 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 CYC1P08574 325 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 EZRP15311 586 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 PAMP19021 973 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 TPSB2P20231 275 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 CHRM3P20309 590 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 FMO4P31512 558 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 RPA3P35244 121 aaPredicted RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 SOX11P35716 441 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 ABATP80404 500 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 BASP1P80723 227 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 SARNPP82979 210 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 FAM53BQ14153 422 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 FASTKQ14296 549 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 TPSAB1Q15661 275 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 VWA2Q5GFL6 755 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 LINC00696Q6ZRV3 163 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 GSTA5Q7RTV2 222 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 LAPTM4BQ86VI4 370 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 METTL27Q8N6F8 245 aaPredicted RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 CATSPER1Q8NEC5 780 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 PSMF1Q92530 271 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 RELTQ969Z4 430 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 MFSD3Q96ES6 412 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 C10orf90Q96M02 699 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 EBNA1BP2Q99848 306 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 RNF32Q9H0A6 362 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 OLAHQ9NV23 265 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 INTS10Q9NVR2 710 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 TRPC4Q9UBN4 977 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 ENTPD4Q9Y227 616 aa14.28□□□□□ -0.12
VAPA-209ENST00000585042 MRPS2Q9Y399 296 aaKnown RBP14.28□□□□□ -0.12
VAPA-209ENST00000585042 IGHV1-45A0A0A0MS14 117 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
VAPA-209ENST00000585042 JRKO75564 520 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 ANXA5P08758 320 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 COX6A1P12074 109 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 MGAT1P26572 445 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 TNFSF10P50591 281 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 ARG2P78540 354 aa14.27□□□□□ -0.13
VAPA-209ENST00000585042 KLHL38Q2WGJ6 581 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms