RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 MFSD4BQ5TF39 518 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 ZC3H7AQ8IWR0 971 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 SHISA5Q8N114 240 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 RPRMLQ8N4K4 120 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 AMER3Q8N944 861 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 NANOS1Q8WY41 292 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 P3H4Q92791 437 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 SCMH1Q96GD3 660 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 NPAS2Q99743 824 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 KCNK13Q9HB14 408 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 C14orf105Q9NVL8 296 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 TRHDEQ9UKU6 1024 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
CSNK1D-224ENST00000584672 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TOXO94900 526 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 ZNF24P17028 368 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TPH1P17752 444 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TYRO3Q06418 890 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 MAPKAPK3Q16644 382 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 HKDC1Q2TB90 917 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 DENND5AQ6IQ26 1287 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TMEM205Q6UW68 189 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 RNF44Q7L0R7 432 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 DCUN1D3Q8IWE4 304 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 EID3Q8N140 333 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TMEM178AQ8NBL3 297 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 TBL1YQ9BQ87 522 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 ACAT2Q9BWD1 397 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 SYNPO2LQ9H987 977 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 KCNJ16Q9NPI9 418 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 LRFN1Q9P244 771 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 KCNN3Q9UGI6 736 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 ST6GALNAC2Q9UJ37 374 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 GNPTGQ9UJJ9 305 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 CDC14AQ9UNH5 594 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 RUVBL1Q9Y265 456 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 HRH3Q9Y5N1 445 aa13.37□□□□□ -0.27
CSNK1D-224ENST00000584672 HRNRQ86YZ3 2850 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 A0A0A6YYC8 382 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 H0YGG7 62 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 H7C0C1 242 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 I3L1I5 382 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 QSOX1O00391 747 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 OR1I1O60431 355 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 CDC40O60508 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ANXA5P08758 320 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 HOXD4P09016 255 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 OR56A5P0C7T3 313 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 CHRNB4P30926 498 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 RFC3P40938 356 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 BDKRB1P46663 353 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ATP5OP48047 213 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ARF3P61204 181 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 SNTB1Q13884 538 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 CCSMST1Q4G0I0 132 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 DNAJC21Q5F1R6 531 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 TMEM198Q66K66 360 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ITPRIPL1Q6GPH6 555 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 SLC22A15Q8IZD6 547 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 FAM98AQ8NCA5 519 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 LILRB4Q8NHJ6 448 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 SLC35G2Q8TBE7 412 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 FAM57AQ8TBR7 257 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 LKAAEAR1Q8TD35 194 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ASB5Q8WWX0 329 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 METTL21AQ8WXB1 218 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 NINJ1Q92982 152 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 HDAC10Q969S8 669 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ZUFSPQ96AP4 578 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 CDKN2AIPNLQ96HQ2 116 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ENAMQ9NRM1 1142 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 NLE1Q9NVX2 485 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 DDX56Q9NY93 547 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 LCMT1Q9UIC8 334 aa13.36□□□□□ -0.27
CSNK1D-224ENST00000584672 A0A0U1RQJ8 604 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 TARM1B6A8C7 271 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 STATHP02808 62 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 RPN2P04844 631 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 SP1P08047 785 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 MSNP26038 577 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 CCR7P32248 378 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 PTGS2P35354 604 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 ADAM8P78325 824 aa13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 PLOD1Q02809 727 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-224ENST00000584672 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms