RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ACSBG2Q5FVE4 666 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 WASHC2DQ5SRD0 308 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 PCGF5Q86SE9 256 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 FBXO15Q8NCQ5 510 aaPredicted RBP20■□□□□ 0.79
CCDC42-203ENST00000581598 SMPDL3AQ92484 453 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 ZNF669Q96BR6 464 aaPredicted RBP20■□□□□ 0.79
CCDC42-203ENST00000581598 FAM129AQ9BZQ8 928 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 DPH5Q9H2P9 285 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 NOL12Q9UGY1 213 aaKnown RBP eCLIP20■□□□□ 0.79
CCDC42-203ENST00000581598 V9GYY5 206 aaPredicted RBP20■□□□□ 0.79
CCDC42-203ENST00000581598 ESYT3A0FGR9 886 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 HYKKA2RU49 373 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 VSTM2BA6NLU5 285 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 ZNF839A8K0R7 811 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 USP1O94782 785 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 CATP04040 527 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 TERF1P54274 439 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 FOXL2P58012 376 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 AIMP2Q13155 320 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 THOC5Q13769 683 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 FASTKQ14296 549 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 MORF4L2Q15014 288 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 TRADDQ15628 312 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 TTLL9Q3SXZ7 439 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 ZNF470Q6ECI4 717 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 FRMPD2BQ6IN97 320 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 HIBCHQ6NVY1 386 aaPredicted RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 PRMT9Q6P2P2 845 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 TMEM151BQ8IW70 566 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 PPIL6Q8IXY8 311 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 IFT20Q8IY31 132 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 NAT8LQ8N9F0 302 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 KCNJ9Q92806 393 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 FAM136AQ96C01 138 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 ZFYVE21Q9BQ24 234 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 TRIM56Q9BRZ2 755 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 DPH7Q9BTV6 452 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 MFRPQ9BY79 579 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 COMMD10Q9Y6G5 202 aa19.99■□□□□ 0.79
CCDC42-203ENST00000581598 MDC1Q14676 2089 aaKnown RBP19.99■□□□□ 0.79
CCDC42-203ENST00000581598 USP9YO00507 2555 aaPredicted RBP19.98■□□□□ 0.79
CCDC42-203ENST00000581598 A0A0J9YVX5 310 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 SMAPO00193 183 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 GNLYP22749 145 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 TNFRSF8P28908 595 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 UQCRFS1P47985 274 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 ITGA8P53708 1063 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 RELAQ04206 551 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 CUL1Q13616 776 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 RAPSNQ13702 412 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 FBXO42Q6P3S6 717 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 ZDHHC24Q6UX98 284 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 EIF1ADQ8N9N8 165 aaKnown RBP19.98■□□□□ 0.79
CCDC42-203ENST00000581598 CALML6Q8TD86 181 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.98■□□□□ 0.79
CCDC42-203ENST00000581598 TM9SF4Q92544 642 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 PLCD4Q9BRC7 762 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 SEMA3GQ9NS98 782 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 B3GNT3Q9Y2A9 372 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 MED16Q9Y2X0 877 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 HS3ST3B1Q9Y662 390 aa19.98■□□□□ 0.79
CCDC42-203ENST00000581598 LOC105369274A0A096LPK9 316 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 LOC102723532A0A0G2JNH3 316 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 SOCS6O14544 535 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 MPC1LP0DKB6 136 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 ENO3P13929 434 aaPredicted RBP19.97■□□□□ 0.79
CCDC42-203ENST00000581598 CALCOCO2Q13137 446 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 NAA30Q147X3 362 aaPredicted RBP19.97■□□□□ 0.79
CCDC42-203ENST00000581598 MUM1Q2TAK8 710 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 PRTGQ2VWP7 1150 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 WDR93Q6P2C0 686 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 DENND6AQ8IWF6 608 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 OR4N4Q8N0Y3 316 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 GIMAP7Q8NHV1 300 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 VPS50Q96JG6 964 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 SIGLEC10Q96LC7 697 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 PSMG3-AS1Q96PY0 264 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 PKP4Q99569 1192 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 SLC30A3Q99726 388 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 SLC29A3Q9BZD2 475 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 CCDC68Q9H2F9 335 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 ZNF304Q9HCX3 659 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 SLC6A20Q9NP91 592 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 MRPS30Q9NP92 439 aaKnown RBP19.97■□□□□ 0.79
CCDC42-203ENST00000581598 ZDHHC18Q9NUE0 388 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 CTSFQ9UBX1 484 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 FBXL4Q9UKA2 621 aa19.97■□□□□ 0.79
CCDC42-203ENST00000581598 NRP2O60462 931 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 CCNDBP1O95273 360 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 MED26O95402 600 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 ATXN8OSP0DMR3 200 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 GP1BBP13224 206 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 ECHS1P30084 290 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 RPA3P35244 121 aaPredicted RBP19.96■□□□□ 0.79
CCDC42-203ENST00000581598 OR1D4P47884 311 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 CARSP49589 748 aaKnown RBP19.96■□□□□ 0.79
CCDC42-203ENST00000581598 PNLIPRP1P54315 467 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 YBX1P67809 324 aaKnown RBP19.96■□□□□ 0.79
CCDC42-203ENST00000581598 CAV1Q03135 178 aa19.96■□□□□ 0.79
CCDC42-203ENST00000581598 PRDX1Q06830 199 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms