RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CMPK2Q5EBM0 449 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 TCP11X2Q5H9J9 407 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 Q5PR19 223 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 WASHC2DQ5SRD0 308 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 PRMT9Q6P2P2 845 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 FIGLAQ6QHK4 219 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 C16orf47Q6ZP98 133 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 CPNE8Q86YQ8 564 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 OR4N4Q8N0Y3 316 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC25A41Q8N5S1 370 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 AMER3Q8N944 861 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 FAM98AQ8NCA5 519 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 CCNYQ8ND76 341 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 ARMC2Q8NEN0 867 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 FAF2Q96CS3 445 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 BTBD6Q96KE9 485 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 ASB8Q9H765 288 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 SYNPO2LQ9H987 977 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 BEX4Q9NWD9 120 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 Q9UFV3 132 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 FKBPLQ9UIM3 349 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 TDRKHQ9Y2W6 561 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 MPDZO75970 2070 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 DNAJC13O75165 2243 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF407Q9C0G0 2248 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ARHGAP21Q5T5U3 1957 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TRIM64A6NGJ6 449 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TRIM64BA6NI03 449 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 GABRR3A8MPY1 467 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 RASGRF2O14827 1237 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 HS6ST1O60243 411 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 CDC40O60508 579 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 SRP72O76094 671 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 FTLP02792 175 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ATP1B2P14415 290 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 MX2P20592 715 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 PKLRP30613 574 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 CD68P34810 354 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ADH7P40394 386 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 RFC3P40938 356 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 PRKCIP41743 596 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ZFP36L2P47974 494 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 AP2B1P63010 937 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 KRTAP1-1Q07627 177 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 RPA4Q13156 261 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 PCBP2Q15366 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TAZQ16635 292 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 MAPKAPK3Q16644 382 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 MEP1AQ16819 746 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 SYT16Q17RD7 645 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 BTBD16Q32M84 506 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 FLYWCH1Q4VC44 716 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ZC3H12BQ5HYM0 836 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 PLAG1Q6DJT9 500 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 RTL6Q6ICC9 239 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 CCDC70Q6NSX1 233 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 HMBOX1Q6NT76 420 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 UNC5DQ6UXZ4 953 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 LANCL3Q6ZV70 420 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ACAD11Q709F0 780 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 GLT6D1Q7Z4J2 308 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 IRF2BP2Q7Z5L9 587 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ZC3H7AQ8IWR0 971 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TBC1D21Q8IYX1 336 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 C2orf73Q8N5S3 287 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 BLOC1S5Q8TDH9 187 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TMEM125Q96AQ2 219 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 Q96MF0 132 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TTYH2Q9BSA4 534 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TGIF2Q9GZN2 237 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 FAM96AQ9H5X1 160 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 GLOD4Q9HC38 313 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 MYO1AQ9UBC5 1043 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 TRPC4Q9UBN4 977 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ZC3H7BQ9UGR2 993 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ASF1AQ9Y294 204 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 PKP3Q9Y446 797 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 FAM215AQ9Y5M1 114 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 ARL5AQ9Y689 179 aa7.23□□□□□ -1.25
SMARCE1-217ENST00000580654 IGLV3-16A0A075B6K0 115 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 USP27XA6NNY8 438 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC25A12O75746 678 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SIX3O95343 332 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 GLI4P10075 376 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC26A3P40879 764 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 CDKN1CP49918 316 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 WNT3AP56704 352 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SNRPNP63162 240 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 OC90Q02509 493 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 CBLBQ13191 982 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 GRB7Q14451 532 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC1A5Q15758 541 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 PRTGQ2VWP7 1150 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 FIGNQ5HY92 759 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 TAX1BP1Q86VP1 789 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 PLD5Q8N7P1 536 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 NIPA2Q8N8Q9 360 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 MLKLQ8NB16 471 aa7.22□□□□□ -1.25
SMARCE1-217ENST00000580654 OR52N2Q8NGI0 321 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms