RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 GOLGA6L10A0A0M3HER8 536 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 A6NL46 340 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 E7ENX8 843 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 ZBTB14O43829 449 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 AVILO75366 819 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 HPP00738 406 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 RPA3P35244 121 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 BDKRB1P46663 353 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 PNLIPRP1P54315 467 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 TAP2Q03519 686 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 TUBB8Q3ZCM7 444 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 PLEKHN1Q494U1 663 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 ANKRD22Q5VYY1 191 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 ICE2Q659A1 982 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 RPUSD3Q6P087 351 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 CASC4Q6P4E1 433 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 CES3Q6UWW8 571 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 KIAA0408Q6ZU52 694 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 REXO1L1PQ8IX06 675 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 PPIL6Q8IXY8 311 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 OR11G2Q8NGC1 345 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 STT3BQ8TCJ2 826 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 OR2A5Q96R48 311 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 LHPPQ9H008 270 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 CDC23Q9UJX2 597 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
SMARCE1-216ENST00000580419 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 CTAGE9A4FU28 777 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 TCP11X1B4DZS4 312 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SMAPO00193 183 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 CBX6O95503 412 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SLC16A8O95907 504 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 ZGLP1P0C6A0 271 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 ERVK-10P10266 1014 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 GNLYP22749 145 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 PSMB5P28074 263 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SLC26A3P40879 764 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 TSFMP43897 325 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SP140Q13342 867 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 PTK6Q13882 451 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 FRMPD2BQ6IN97 320 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 CYHR1Q6ZMK1 362 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 RIPOR1Q6ZS17 1223 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 PCGF5Q86SE9 256 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 LRRC56Q8IYG6 542 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 C2orf73Q8N5S3 287 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 ZNF480Q8WV37 535 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 ZNF669Q96BR6 464 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 SNRNP40Q96DI7 357 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 C10orf90Q96M02 699 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 TRIM56Q9BRZ2 755 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 MKKSQ9NPJ1 570 aaPredicted RBP13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 CTSFQ9UBX1 484 aa13.82□□□□□ -0.2
SMARCE1-216ENST00000580419 LOC102723996A0A087X1L8 192 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 LOC105369274A0A096LPK9 316 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 LOC102723532A0A0G2JNH3 316 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 GOLGA8KD6RF30 607 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 H0YGG7 62 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 GOLGA8TH3BQL2 631 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 SLC16A5O15375 505 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CCND1P24385 295 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 MCM3P25205 808 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 ARF3P61204 181 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 KLC1Q07866 573 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CBLBQ13191 982 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 FASTKQ14296 549 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 TRIP13Q15645 432 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 RBBP7Q16576 425 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 TAX1BP1Q86VP1 789 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 OR4N4Q8N0Y3 316 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 GIMAP7Q8NHV1 300 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CD200R1Q8TD46 325 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 RERGQ96A58 199 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 PKP4Q99569 1192 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CRB3Q9BUF7 120 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 SARGQ9BW04 601 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 ILKAPQ9H0C8 392 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 AGPAT4Q9NRZ5 378 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 TMEM184CQ9NVA4 438 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 GALPQ9UBC7 116 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 PCYOX1Q9UHG3 505 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 FBXO5Q9UKT4 447 aa13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CORO1CQ9ULV4 474 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 RUVBL2Q9Y230 463 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-216ENST00000580419 CRYBG3Q68DQ2 2970 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms