RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CASC4Q6P4E1 433 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 LRRC8BQ6P9F7 803 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 IGFL2Q6UWQ7 119 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 ISLR2Q6UXK2 745 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 CENPUQ71F23 418 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 RNF44Q7L0R7 432 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 SDCCAG8Q86SQ7 713 aaPredicted RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 PAQR7Q86WK9 346 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 LRRC6Q86X45 466 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 OR1N1Q8NGS0 311 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 OR9A1PQ8NGU1 263 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 BRIX1Q8TDN6 353 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 PPP4R1Q8TF05 950 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 PEX13Q92968 403 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 CABS1Q96KC9 395 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 MAGEB10Q96LZ2 347 aaPredicted RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 BARD1Q99728 777 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 MACROD1Q9BQ69 325 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 RAB11FIP5Q9BXF6 653 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 MRPS30Q9NP92 439 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 EIF2B3Q9NR50 452 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 FBXO6Q9NRD1 293 aaPredicted RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 AGPAT4Q9NRZ5 378 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 SEMA3GQ9NS98 782 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 TRPC4Q9UBN4 977 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 TAC3Q9UHF0 121 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 SOX13Q9UN79 622 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 RUVBL1Q9Y265 456 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 MRPS2Q9Y399 296 aaKnown RBP8.51□□□□□ -1.05
GGA3-207ENST00000578896 FAM169AQ9Y6X4 670 aa8.51□□□□□ -1.05
GGA3-207ENST00000578896 A0A0A6YYC8 382 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 OR2W5A6NFC9 320 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 GOLGA8MH3BSY2 632 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 I3L1I5 382 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 MAP2K7O14733 419 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 KPNA5O15131 536 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 P2RX6O15547 441 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 FOXS1O43638 330 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 KLHL41O60662 606 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 JRKO75564 520 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 MATN4O95460 622 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ERVK-10P10266 1014 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 COX6A1P12074 109 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 PKMP14618 531 aaKnown RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 ACPPP15309 386 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 CDC25BP30305 580 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 CCNFP41002 786 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 TSFMP43897 325 aaKnown RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 EMP2P54851 167 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 KCNK10P57789 538 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 GPS1Q13098 491 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 CTBP1Q13363 440 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 GBX1Q14549 363 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 TYSND1Q2T9J0 566 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 MUM1Q2TAK8 710 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ANKRD20A4Q4UJ75 823 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ATG9BQ674R7 924 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 MRNIPQ6NTE8 343 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 NEPROQ6NW34 567 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ZNF549Q6P9A3 640 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 DRICH1Q6PGQ1 229 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 ADCK2Q7Z695 626 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 CAND1Q86VP6 1230 aaKnown RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 DENND6AQ8IWF6 608 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 REXO1L1PQ8IX06 675 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 RAB42Q8N4Z0 105 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 CSNK1A1LQ8N752 337 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ST6GALNAC3Q8NDV1 305 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 GIMAP7Q8NHV1 300 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 HMGCLL1Q8TB92 370 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 FAR1Q8WVX9 515 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 SMPDL3AQ92484 453 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 PSMF1Q92530 271 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ZNF669Q96BR6 464 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 MMABQ96EY8 250 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 ZFYVE21Q9BQ24 234 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 TSGA10Q9BZW7 698 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 EPS8L2Q9H6S3 715 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 MRM3Q9HC36 420 aaKnown RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 SPATA7Q9P0W8 599 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 ZNF282Q9UDV7 671 aaPredicted RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 PCYOX1Q9UHG3 505 aa8.5□□□□□ -1.05
GGA3-207ENST00000578896 NXT1Q9UKK6 140 aaKnown RBP8.5□□□□□ -1.05
GGA3-207ENST00000578896 NSG1A0A0A6YYJ2 146 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 IGHV3-20A0A0C4DH32 117 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 CTAGE9A4FU28 777 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 IDSB3KWA1 339 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 E5RI56 91 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 MYO1CO00159 1063 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 HAT1O14929 419 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 ZG16O60844 167 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 PSIP1O75475 530 aaKnown RBP8.49□□□□□ -1.05
GGA3-207ENST00000578896 WISP2O76076 250 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 HPP00738 406 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 KRT14P02533 472 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 ESR1P03372 595 aa8.49□□□□□ -1.05
GGA3-207ENST00000578896 HEXBP07686 556 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms