RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 FAM45AQ8TCE6 357 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 CDKL2Q92772 493 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 N4BP2L2Q92802 583 aaPredicted RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 IL17FQ96PD4 163 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 DHRS4Q9BTZ2 278 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 INTS7Q9NVH2 962 aaKnown RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.37■□□□□ 0.05
VAPA-204ENST00000577901 C5AR2Q9P296 337 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 SLC17A6Q9P2U8 582 aa15.37■□□□□ 0.05
VAPA-204ENST00000577901 PCSK5Q92824 1860 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 GSTA2P09210 222 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 SSTR1P30872 391 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 GUCY2DQ02846 1103 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 PDAP1Q13442 181 aaKnown RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 NR6A1Q15406 480 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 PLEKHN1Q494U1 663 aaPredicted RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 GLE1Q53GS7 698 aaKnown RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 RBM20Q5T481 1227 aaKnown RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 VWA5B1Q5TIE3 1220 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 HECTD2Q5U5R9 776 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 ZNF385CQ66K41 422 aaPredicted RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 ZDHHC24Q6UX98 284 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 CYHR1Q6ZMK1 362 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 CAPN12Q6ZSI9 719 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 CDHR3Q6ZTQ4 885 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 CYS1Q717R9 158 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 TRIM73Q86UV7 250 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 TAX1BP1Q86VP1 789 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 CEP112Q8N8E3 955 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 ASB11Q8WXH4 323 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 SNRNP40Q96DI7 357 aaKnown RBP15.36■□□□□ 0.05
VAPA-204ENST00000577901 CHRNA10Q9GZZ6 450 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 TXNDC16Q9P2K2 825 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 MED13Q9UHV7 2174 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 NOTCH2Q04721 2471 aa15.36■□□□□ 0.05
VAPA-204ENST00000577901 ZNF839A8K0R7 811 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 ARHGEF33A8MVX0 844 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 GFYI3L273 518 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 MYO1CO00159 1063 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 KLF7O75840 302 aaPredicted RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 FKBP9O95302 570 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 SYF2O95926 243 aaKnown RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 PEBP1P30086 187 aaKnown RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 MAGEA4P43358 317 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 CDKN2DP55273 166 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 IL2P60568 153 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 ARHGAP19Q14CB8 494 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 CYP2A13Q16696 494 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 MLIPQ5VWP3 458 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 PAQR3Q6TCH7 311 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 CEP128Q6ZU80 1094 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 UBE2R2Q712K3 238 aaPredicted RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 MAMDC2Q7Z304 686 aaPredicted RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 MRGPREQ86SM8 312 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 GPR135Q8IZ08 494 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 IQCKQ8N0W5 287 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 MYO1HQ8N1T3 1032 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 FBXO15Q8NCQ5 510 aaPredicted RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 DENND1AQ8TEH3 1009 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 EEF1AKMT1Q8WVE0 214 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 FER1L6-AS2Q96M78 137 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 IP6K3Q96PC2 410 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 C17orf62Q9BQA9 187 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
VAPA-204ENST00000577901 B3GNT3Q9Y2A9 372 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 MYO9AB2RTY4 2548 aa15.35■□□□□ 0.05
VAPA-204ENST00000577901 CELSR2Q9HCU4 2923 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 ESYT3A0FGR9 886 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 WIPF3A6NGB9 483 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 OR2B3O76000 313 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 CBX6O95503 412 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 CLDN1O95832 211 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 ALPPP05187 535 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 C8GP07360 202 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 COL8A1P27658 744 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 TIAL1Q01085 375 aaKnown RBP eCLIP15.34■□□□□ 0.05
VAPA-204ENST00000577901 SSPNQ14714 243 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 ZNF787Q6DD87 383 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 PIWIL4Q7Z3Z4 852 aaKnown RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 CISD2Q8N5K1 135 aaKnown RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 MCOLN3Q8TDD5 553 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 SMPDL3AQ92484 453 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 ZUFSPQ96AP4 578 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 LINGO1Q96FE5 620 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 PKP4Q99569 1192 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 FAM129AQ9BZQ8 928 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 FAM60AQ9NP50 221 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 ASF1BQ9NVP2 202 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 MTRF1LQ9UGC7 380 aaKnown RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 GPN3Q9UHW5 284 aaPredicted RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 PTRH2Q9Y3E5 179 aaKnown RBP15.34■□□□□ 0.05
VAPA-204ENST00000577901 AP1M2Q9Y6Q5 423 aa15.34■□□□□ 0.05
VAPA-204ENST00000577901 CRYBG3Q68DQ2 2970 aa15.33■□□□□ 0.05
VAPA-204ENST00000577901 RP1L1Q8IWN7 2480 aaPredicted RBP15.33■□□□□ 0.04
VAPA-204ENST00000577901 TCRBV9S1A1TA0A576 114 aa15.33■□□□□ 0.04
VAPA-204ENST00000577901 PEX12O00623 359 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms