RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 C19orf43Q9BQ61 176 aa15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 TBL1YQ9BQ87 522 aa15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 LIME1Q9H400 295 aa15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 MKKSQ9NPJ1 570 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 NLE1Q9NVX2 485 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 DNAJB12Q9NXW2 375 aaKnown RBP15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 KCNN3Q9UGI6 736 aa15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 RPH3AQ9Y2J0 694 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-211ENST00000575783 HACD1B0YJ81 288 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 H7C0C1 242 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 H7C0S8 307 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 PRPF4O43172 522 aaKnown RBP eCLIP15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 TOXO94900 526 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 SERPINC1P01008 464 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 ANXA5P08758 320 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 FOSL1P15407 271 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 TPH1P17752 444 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 SLC26A3P40879 764 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 ATP5OP48047 213 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 EFNA3P52797 238 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 ZBED6P86452 979 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 TFF3Q07654 80 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 DCUN1D3Q8IWE4 304 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 SLC22A15Q8IZD6 547 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 MARVELD2Q8N4S9 558 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 AMER3Q8N944 861 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 FAM98AQ8NCA5 519 aaKnown RBP15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 LILRB4Q8NHJ6 448 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 NINJ1Q92982 152 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 TGIF2Q9GZN2 237 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 KCNK13Q9HB14 408 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 DLL4Q9NR61 685 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 LMBRD1Q9NUN5 540 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 RNF6Q9Y252 685 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 ABCA4P78363 2273 aa15.4■□□□□ 0.06
CTDNEP1-211ENST00000575783 H0YGG7 62 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR1I1O60431 355 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 TPOP07202 933 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 SP1P08047 785 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 HOXD4P09016 255 aaPredicted RBP15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 TMEM253P0C7T8 217 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 ZNF24P17028 368 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 MSX1P28360 303 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 CHRNB4P30926 498 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 CCR7P32248 378 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 PTGER1P34995 402 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 ARF3P61204 181 aaPredicted RBP15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 MAT1AQ00266 395 aaKnown RBP15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 ITIH4Q14624 930 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 MAPKAPK3Q16644 382 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 MEP1AQ16819 746 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 PRTGQ2VWP7 1150 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 RNFT1Q5M7Z0 435 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC25A25Q6KCM7 469 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 FBXO42Q6P3S6 717 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 TTC23LQ6PF05 361 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 CRLF3Q8IUI8 442 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR2L3Q8NG85 312 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 ALS2CR12Q96Q35 445 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 ZFYVE21Q9BQ24 234 aa15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 NAT10Q9H0A0 1025 aaKnown RBP15.39■□□□□ 0.05
CTDNEP1-211ENST00000575783 SNRNP200O75643 2136 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 A0A0A6YYC8 382 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR51F1A6NGY5 319 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 I3L1I5 382 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 MAN1A2O60476 641 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 SUN1O94901 812 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 FKBP9O95302 570 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 PTGS2P35354 604 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 YBX1P67809 324 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 TYRO3Q06418 890 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 HKDC1Q2TB90 917 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 SKOR2Q2VWA4 1001 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 ANKRD20A2Q5SQ80 823 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 MFSD4BQ5TF39 518 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 ANKRD20A1Q5TYW2 823 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 ANKRD20A3Q5VUR7 823 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 PLAG1Q6DJT9 500 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 H3F3CQ6NXT2 135 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 LRRC8BQ6P9F7 803 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 PACS1Q6VY07 963 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 LANCL3Q6ZV70 420 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 RNF44Q7L0R7 432 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 CPEB2Q7Z5Q1 589 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 CD163Q86VB7 1156 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 CCDC71Q8IV32 467 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 ZC3H7AQ8IWR0 971 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 HORMAD2Q8N7B1 307 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 HDAC10Q969S8 669 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 MVB12AQ96EY5 273 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 SMR3AQ99954 134 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 ST6GALNAC2Q9UJ37 374 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 CAPN11Q9UMQ6 739 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 RUVBL1Q9Y265 456 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 HRH3Q9Y5N1 445 aa15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 FLNAP21333 2647 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-211ENST00000575783 A0A1B0GTH9 108 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 KRT87PA6NCN2 255 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms