RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 FLVCR1-AS1Q8TAF5 88 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 ELMO1Q92556 727 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 CABS1Q96KC9 395 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 VAT1Q99536 393 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 ZNF700Q9H0M5 742 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 CLEC4MQ9H2X3 399 aaPredicted RBP10.52□□□□□ -0.73
VPS53-207ENST00000570510 C14orf105Q9NVL8 296 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 ZDHHC3Q9NYG2 299 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 FITM1A5D6W6 292 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 C3orf70A6NLC5 250 aaPredicted RBP10.51□□□□□ -0.73
VPS53-207ENST00000570510 MIF4GDA9UHW6 222 aaKnown RBP10.51□□□□□ -0.73
VPS53-207ENST00000570510 ADAM10O14672 748 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 CDC40O60508 579 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS53-207ENST00000570510 S1PR4O95977 384 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 RPN2P04844 631 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 COMTP21964 271 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 TAS2R40P59535 323 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 DYNLT1P63172 113 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 PLOD1Q02809 727 aaPredicted RBP10.51□□□□□ -0.73
VPS53-207ENST00000570510 TUBA3CQ13748 450 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 MEP1AQ16819 746 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 GPR33Q49SQ1 333 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 FCRLBQ6BAA4 426 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 SPINK14Q6IE38 97 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 TUBA3EQ6PEY2 450 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 NPNTQ6UXI9 565 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 CXXC5Q7LFL8 322 aaKnown RBP10.51□□□□□ -0.73
VPS53-207ENST00000570510 GALNTL5Q7Z4T8 443 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 CLDN19Q8N6F1 224 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 OR10Q1Q8NGQ4 319 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 TFB1MQ8WVM0 346 aaKnown RBP10.51□□□□□ -0.73
VPS53-207ENST00000570510 RAPGEF5Q92565 580 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 ZUFSPQ96AP4 578 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 PWWP2AQ96N64 755 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 FRMD6Q96NE9 622 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 SIGLEC12Q96PQ1 595 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 TRIM51Q9BSJ1 452 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 HES7Q9BYE0 225 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 LIME1Q9H400 295 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 KCNK13Q9HB14 408 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 SLC39A10Q9ULF5 831 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 MKL2Q9ULH7 1088 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 RNF6Q9Y252 685 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 PCDHA3Q9Y5H8 950 aa10.51□□□□□ -0.73
VPS53-207ENST00000570510 A0A0J9YVX5 310 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 ASPDHA6ND91 283 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 HACD1B0YJ81 288 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 QSOX1O00391 747 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 FFAR3O14843 346 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 TFECO14948 347 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 GPR42O15529 346 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 PROM1O43490 865 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 PRMT3O60678 531 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 CTAG2O75638 210 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 TOXO94900 526 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 FTH1P02794 183 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 C8orf89P0DMQ9 161 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 CD9P21926 228 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 CTNNA2P26232 953 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 PEBP1P30086 187 aaKnown RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 CTNNA1P35221 906 aaKnown RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 CD96P40200 585 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 CDKN2BP42772 138 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 KEAP1Q14145 624 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 FASTKQ14296 549 aaKnown RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 TTC23LQ6PF05 361 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 TMEM139Q8IV31 216 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 ZZZ3Q8IYH5 903 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 CFAP61Q8NHU2 1237 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 FAM57AQ8TBR7 257 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 HDAC10Q969S8 669 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 MMABQ96EY8 250 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 OLFM3Q96PB7 478 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 PPP1R2P1Q96PQ5 205 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 GPATCH1Q9BRR8 931 aaKnown RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 TP63Q9H3D4 680 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 MKKSQ9NPJ1 570 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 SMARCAL1Q9NZC9 954 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 LRFN1Q9P244 771 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 STOX2Q9P2F5 926 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 C19orf25Q9UFG5 118 aaPredicted RBP10.5□□□□□ -0.73
VPS53-207ENST00000570510 RSPH14Q9UHP6 348 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 GNPTGQ9UJJ9 305 aa10.5□□□□□ -0.73
VPS53-207ENST00000570510 IGLV3-12A0A075B6K2 115 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 SOWAHDA6NJG2 315 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 TARM1B6A8C7 271 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 F8W8V4 182 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 SEC24DO94855 1032 aaPredicted RBP10.49□□□□□ -0.73
VPS53-207ENST00000570510 AP2A2O94973 939 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 AGTP01019 485 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 HEXAP06865 529 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 SP1P08047 785 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 ACRV1P26436 265 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 PCSK6P29122 969 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 PKLRP30613 574 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 MC4RP32245 332 aa10.49□□□□□ -0.73
VPS53-207ENST00000570510 CD68P34810 354 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms