RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 C17orf53Q8N3J3 647 aaPredicted RBP19.4■□□□□ 0.7
CLK3-225ENST00000569063 FBXO36Q8NEA4 188 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 ERP44Q9BS26 406 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 SLC26A1Q9H2B4 701 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 WDR54Q9H977 334 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 PARVBQ9HBI1 364 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 MOCS1Q9NZB8 636 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 PDE10AQ9Y233 779 aa19.4■□□□□ 0.7
CLK3-225ENST00000569063 TLN1Q9Y490 2541 aaKnown RBP19.39■□□□□ 0.69
CLK3-225ENST00000569063 TSPAN12O95859 305 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 EZRP15311 586 aaKnown RBP19.39■□□□□ 0.69
CLK3-225ENST00000569063 NR1D1P20393 614 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 FDXRP22570 491 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 OTX2P32243 289 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 EMP3P54852 163 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 IL2P60568 153 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 MGAT5Q09328 741 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 KLRB1Q12918 225 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 ATP1A4Q13733 1029 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 FASTKD3Q14CZ7 662 aaKnown RBP19.39■□□□□ 0.69
CLK3-225ENST00000569063 PRTGQ2VWP7 1150 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 FAM45BPQ6NSW5 357 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 COX15Q7KZN9 410 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 MRGPREQ86SM8 312 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 GPATCH11Q8N954 259 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 FAM45AQ8TCE6 357 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 NACC2Q96BF6 587 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 LINGO1Q96FE5 620 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 SLC25A23Q9BV35 468 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 WHRNQ9P202 907 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 STOX2Q9P2F5 926 aaPredicted RBP19.39■□□□□ 0.69
CLK3-225ENST00000569063 PCM1Q15154 2024 aa19.39■□□□□ 0.69
CLK3-225ENST00000569063 H0YGG7 62 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 RAD51CO43502 376 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 MED26O95402 600 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 PDGFAP04085 211 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 EIF2S1P05198 315 aaKnown RBP19.38■□□□□ 0.69
CLK3-225ENST00000569063 UMODP07911 640 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 ATXN8OSP0DMR3 200 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 ARF3P61204 181 aaPredicted RBP19.38■□□□□ 0.69
CLK3-225ENST00000569063 MRPS25P82663 173 aaKnown RBP19.38■□□□□ 0.69
CLK3-225ENST00000569063 PDAP1Q13442 181 aaKnown RBP19.38■□□□□ 0.69
CLK3-225ENST00000569063 PRMT9Q6P2P2 845 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 SYT10Q6XYQ8 523 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.38■□□□□ 0.69
CLK3-225ENST00000569063 PCSK5Q92824 1860 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 OR2A5Q96R48 311 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 ZFATQ9P243 1243 aa19.38■□□□□ 0.69
CLK3-225ENST00000569063 WISP1O95388 367 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 IGHEP01854 428 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 HRH2P25021 359 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 OR1D4P47884 311 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 PGDP52209 483 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 FOXL2P58012 376 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 TLE1Q04724 770 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 C2orf54Q08AI8 447 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 CALCOCO2Q13137 446 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 NKG7Q16617 165 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 MUM1Q2TAK8 710 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 THEMIS2Q5TEJ8 643 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 DUPD1Q68J44 220 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 SLC26A11Q86WA9 606 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 ZBED8Q8IZ13 594 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 TEX19Q8NA77 164 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 PDLIM5Q96HC4 596 aaKnown RBP19.37■□□□□ 0.69
CLK3-225ENST00000569063 C10orf90Q96M02 699 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 FER1L6-AS2Q96M78 137 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 OLFM1Q99784 485 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 TRIM4Q9C037 500 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 PCBD2Q9H0N5 130 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 EPN3Q9H201 632 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 SYNPO2LQ9H987 977 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 ZNF304Q9HCX3 659 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 CCDC177Q9NQR7 707 aaPredicted RBP19.37■□□□□ 0.69
CLK3-225ENST00000569063 ABCF3Q9NUQ8 709 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 PCDHGB7Q9Y5F8 929 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 PSAT1Q9Y617 370 aa19.37■□□□□ 0.69
CLK3-225ENST00000569063 HELZ2Q9BYK8 2649 aaKnown RBP19.37■□□□□ 0.69
CLK3-225ENST00000569063 VSTM2BA6NLU5 285 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 PYCARD-AS1I3L0S3 204 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 PEX12O00623 359 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 HIST1H2AGP0C0S8 130 aaPredicted RBP19.36■□□□□ 0.69
CLK3-225ENST00000569063 HIST1H2ADP20671 130 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 CSRP3P50461 194 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 TBPL1P62380 186 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 PHKG1Q16816 387 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 AGTRAPQ6RW13 159 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 PPP1R32Q7Z5V6 425 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 STRA8Q7Z7C7 330 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 ZC3HC1Q86WB0 502 aaKnown RBP19.36■□□□□ 0.69
CLK3-225ENST00000569063 TMEM151BQ8IW70 566 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 DTWD1Q8N5C7 304 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 CSNK1A1LQ8N752 337 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 FDCSPQ8NFU4 85 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 RERGQ96A58 199 aaPredicted RBP19.36■□□□□ 0.69
CLK3-225ENST00000569063 HIST1H2AHQ96KK5 128 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 SPSB2Q99619 263 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 HIST1H2AJQ99878 128 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 H2AFJQ9BTM1 129 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms