RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SIRT6Q8N6T7 355 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 C10orf90Q96M02 699 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 TUBB6Q9BUF5 446 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 ZNF700Q9H0M5 742 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 CATSPERZQ9NTU4 200 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 PLA2G3Q9NZ20 509 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 CIDEBQ9UHD4 219 aa14.98□□□□□ -0.01
HERPUD1-215ENST00000568676 IQCF5A8MTL0 148 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 E7EVH7 732 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 PRAMEF2O60811 474 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 MED26O95402 600 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 WDPCPO95876 746 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 ANXA5P08758 320 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 PKMP14618 531 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 RPS3P23396 243 aaKnown RBP eCLIP14.97□□□□□ -0.014e-7■■□□□ 12.8
HERPUD1-215ENST00000568676 SLC26A3P40879 764 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 AADACL2Q6P093 401 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 PPHLN1Q8NEY8 458 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 LKAAEAR1Q8TD35 194 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 MESP1Q9BRJ9 268 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 DPH7Q9BTV6 452 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 FRMD8P1Q9BZ68 369 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 SLC2A6Q9UGQ3 507 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 AMFRQ9UKV5 643 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 TCAF1Q9Y4C2 921 aa14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 EPN1Q9Y6I3 576 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-215ENST00000568676 FBN2P35556 2912 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 A0A1W2PPV9 198 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 SLC19A2O60779 497 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 CCNDBP1O95273 360 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 CAPN3P20807 821 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 PSMB5P28074 263 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 ATP5DP30049 168 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 SSTR2P30874 369 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 HSD17B2P37059 387 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 EEF1A2Q05639 463 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 FAM53BQ14153 422 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 SEMA3AQ14563 771 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 ARHGAP19Q14CB8 494 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 FBXO42Q6P3S6 717 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 TMEM205Q6UW68 189 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 SYCE1Q8N0S2 351 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 KRT222Q8N1A0 295 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 DTWD1Q8N5C7 304 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 LRRC57Q8N9N7 239 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 THAP3Q8WTV1 239 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 ZNF778Q96MU6 729 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 PLCD4Q9BRC7 762 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 YIPF2Q9BWQ6 316 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 P2RY12Q9H244 342 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 STMN3Q9NZ72 180 aa14.96□□□□□ -0.01
HERPUD1-215ENST00000568676 RCCD1A6NED2 376 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF839A8K0R7 811 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 H0YGG7 62 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 AP3B1O00203 1094 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 PFDN6O15212 129 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 CD3EAPO15446 510 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 ERGP11308 486 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 ESRRAP11474 423 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 EZRP15311 586 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 MST1P26927 711 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 BDKRB1P46663 353 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 ARF3P61204 181 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 PCOLCEQ15113 449 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 KRTCAP3Q53RY4 240 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 PCID2Q5JVF3 399 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 PEX26Q7Z412 305 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 CSNK1A1LQ8N752 337 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 AMER3Q8N944 861 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 METTL21AQ8WXB1 218 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 SMPDL3AQ92484 453 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 RERGQ96A58 199 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 MMABQ96EY8 250 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 IMMP1LQ96LU5 166 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 TRIM8Q9BZR9 551 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 DRC3Q9H069 523 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 ETNK1Q9HBU6 452 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 MRPS30Q9NP92 439 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 C19orf25Q9UFG5 118 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 RUVBL1Q9Y265 456 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 NFS1Q9Y697 457 aa14.95□□□□□ -0.02
HERPUD1-215ENST00000568676 CSMD2Q7Z408 3487 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 H3BMM5 538 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 CDK2AP1O14519 115 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 NDUFS3O75489 264 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 MATN4O95460 622 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 C8orf89P0DMQ9 161 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 ITGAMP11215 1152 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 RPA3P35244 121 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF33BQ06732 778 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 NDUFA9Q16795 377 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 ANKRD20A4Q4UJ75 823 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 OR9A1PQ8NGU1 263 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 MAGED4Q96JG8 741 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF354BQ96LW1 612 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 PANX2Q96RD6 677 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 GPAMQ9HCL2 828 aa14.94□□□□□ -0.02
HERPUD1-215ENST00000568676 FAM114A2Q9NRY5 505 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms