RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SLCO2B1O94956 709 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 SLC26A3P40879 764 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 CSNK1G2P78368 415 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 ALDH6A1Q02252 535 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 TMED2Q15363 201 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 AFTPHQ6ULP2 937 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 MEX3BQ6ZN04 569 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 HMGCLL1Q8TB92 370 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 FAM118BQ9BPY3 351 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 TUBB6Q9BUF5 446 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 PIH1D1Q9NWS0 290 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 NEU2Q9Y3R4 380 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 NIPBLQ6KC79 2804 aaeCLIP11.2□□□□□ -0.62
GTF3C1-209ENST00000568569 OR2A25A4D2G3 310 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 H0YGG7 62 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 PHF2O75151 1096 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 ANXA5P08758 320 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 TPM1P09493 284 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 C8orf89P0DMQ9 161 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 PPARGP37231 505 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 ARF3P61204 181 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 CCDC38Q502W7 563 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 GARNL3Q5VVW2 1013 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 C11orf63Q6NUN7 778 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 TMEM205Q6UW68 189 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 CSNK1A1LQ8N752 337 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 AMER3Q8N944 861 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 OR13J1Q8NGT2 312 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 OR2A1Q8NGT9 310 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 CA5BP1Q8WTZ4 195 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 PHF10Q8WUB8 498 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 HDAC10Q969S8 669 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 MMABQ96EY8 250 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 TREX2Q9BQ50 279 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 CARD6Q9BX69 1037 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 OSBPL8Q9BZF1 889 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 RUVBL1Q9Y265 456 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-209ENST00000568569 ASPDHA6ND91 283 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 IQCF5A8MTL0 148 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 A8MUI8 341 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 NPIPA5E9PKD4 350 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 E9PLN8 166 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 C1orf105O95561 183 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 ABOP16442 354 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 AOAHP28039 575 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 EEF1DP29692 281 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 CMPK1P30085 196 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 CTNNA1P35221 906 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 PTPN7P35236 360 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 P3H1Q32P28 736 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 PLAG1Q6DJT9 500 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 FBXO42Q6P3S6 717 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 NCCRP1Q6ZVX7 275 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 ZC3H7AQ8IWR0 971 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 EID3Q8N140 333 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 BEST3Q8N1M1 668 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 AGAP11Q8TF27 550 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 SKA2Q8WVK7 121 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 METTL21AQ8WXB1 218 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 SDCCAG3Q96C92 435 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 MRFAP1L1Q96HT8 127 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 ZNF354BQ96LW1 612 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 VKORC1Q9BQB6 163 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 DPH7Q9BTV6 452 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 DRC3Q9H069 523 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 KLHL1Q9NR64 748 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 TTC7AQ9ULT0 858 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-209ENST00000568569 DNHD1Q96M86 4753 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 A0A1W2PPV9 198 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 PRMT5O14744 637 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 PSMD3O43242 534 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 MFAP3LO75121 409 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 SEC24DO94855 1032 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TJP3O95049 919 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 METTL18O95568 372 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TSPAN12O95859 305 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 GAS8O95995 478 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 CYC1P08574 325 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 CD46P15529 392 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 CCNFP41002 786 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 BDKRB1P46663 353 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 ART1P52961 327 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 TUBA3CQ13748 450 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 BTBD16Q32M84 506 aa11.17□□□□□ -0.62
GTF3C1-209ENST00000568569 CCSMST1Q4G0I0 132 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms