RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DMTNQ08495 405 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 SLC10A2Q12908 348 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 PAFAH1B3Q15102 231 aaKnown RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 NOMO1Q15155 1222 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 TEX35Q5T0J7 233 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 FAM182AQ5T1J6 154 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 TTC27Q6P3X3 843 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 BHLHB9Q6PI77 547 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 YTHDF3Q7Z739 585 aaKnown RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 ARHGAP12Q8IWW6 846 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 HORMAD2Q8N7B1 307 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 OR5M3Q8NGP4 307 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 MAGOHBQ96A72 148 aaKnown RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 C8orf44Q96CB5 159 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 C10orf88Q9H8K7 445 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 HAUS2Q9NVX0 235 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 DTLQ9NZJ0 730 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 IL1RAPL1Q9NZN1 696 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 C3orf18Q9UK00 162 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 CBLCQ9ULV8 474 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 V9GYY5 206 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 TRIM64A6NGJ6 449 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 TRIM64BA6NI03 449 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 H3BMH7 237 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 POP7O75817 140 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 GOSR1O95249 250 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 RBP3P10745 1247 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 MX2P20592 715 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 COILP38432 576 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 ZFP36L2P47974 494 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 NUP107P57740 925 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 DCDC1P59894 354 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 RPL26P61254 145 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 TMEM115Q12893 351 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 DAZAP2Q15038 168 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 CYP1B1Q16678 543 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 SLC25A35Q3KQZ1 300 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 MARC1Q5VT66 337 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 KIAA0930Q6ICG6 404 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 DARS2Q6PI48 645 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 CCDC137Q6PK04 289 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 MCATQ8IVS2 390 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 CHERPQ8IWX8 916 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 PGBD5Q8N414 524 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 ACVR1CQ8NER5 493 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 LPCAT1Q8NF37 534 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 SLC35B2Q8TB61 432 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 BRSK1Q8TDC3 778 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 OLFM3Q96PB7 478 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 LYSMD1Q96S90 227 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 UTP23Q9BRU9 249 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 WWP1Q9H0M0 922 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 CTSFQ9UBX1 484 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 ACSL5Q9ULC5 683 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 RPL26L1Q9UNX3 145 aaKnown RBP9.22□□□□□ -0.93
CAPN3-216ENST00000567071 PLCL2Q9UPR0 1127 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 CHKBQ9Y259 395 aa9.22□□□□□ -0.93
CAPN3-216ENST00000567071 MGAM2Q2M2H8 2515 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 A0A1B0GTH9 108 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 BTN3A1O00481 513 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 CLDN4O14493 209 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 TFECO14948 347 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 DSCR3O14972 297 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PRMT3O60678 531 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 SUN1O94901 812 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 TP53P04637 393 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 ITGAMP11215 1152 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 COX6A1P12074 109 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PBLDP30039 288 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 UQCRC1P31930 480 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 NR2C2P49116 596 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 KLC1Q07866 573 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 GALNT2Q10471 571 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 AP1B1Q10567 949 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 SNTB1Q13884 538 aaKnown RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 NFE2L1Q14494 772 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PDK1Q15118 436 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 OASLQ15646 514 aaKnown RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 CCNG2Q16589 344 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 C8orf74Q6P047 294 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 SPESP1Q6UW49 350 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 CXorf67Q86X51 503 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 CDKL3Q8IVW4 592 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PRSS58Q8IYP2 241 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 CCNYQ8ND76 341 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 MIEF2Q96C03 454 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF354BQ96LW1 612 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 QKIQ96PU8 341 aaKnown RBP eCLIP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 C19orf24Q9BVV8 132 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 FRMD8P1Q9BZ68 369 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 POLR1EQ9GZS1 481 aaKnown RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 PLEKHF2Q9H8W4 249 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 FAM60AQ9NP50 221 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms