RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SIRPAP78324 504 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 LMOD3Q0VAK6 560 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 TBCEQ15813 527 aaPredicted RBP1.61□□□□□ -2.15
SMG1-212ENST00000566328 TTC31Q49AM3 519 aaPredicted RBP1.61□□□□□ -2.15
SMG1-212ENST00000566328 FIGLAQ6QHK4 219 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 HEATR4Q86WZ0 1026 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 CEP57L1Q8IYX8 460 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 OR52B6Q8NGF0 335 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 OR4D10Q8NGI6 311 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 CHURC1Q8WUH1 139 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 CCDC34Q96HJ3 373 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 C4orf45Q96LM5 186 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 ZNF285Q96NJ3 590 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 KCNK15Q9H427 330 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 DIAPH3Q9NSV4 1193 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 LARSQ9P2J5 1176 aaKnown RBP1.61□□□□□ -2.15
SMG1-212ENST00000566328 IL17BQ9UHF5 180 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 BAIAP2L1Q9UHR4 511 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 LRRFIP2Q9Y608 721 aaKnown RBP1.61□□□□□ -2.15
SMG1-212ENST00000566328 SHROOM2Q13796 1616 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 ABCC2Q92887 1545 aa1.61□□□□□ -2.15
SMG1-212ENST00000566328 LRRC72A6NJI9 287 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 MYO1GB0I1T2 1018 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 G3V2L1 256 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PDHXO00330 501 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 SURF4O15260 269 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 NXPH4O95158 308 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PYGLP06737 847 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 HOXC4P09017 264 aaPredicted RBP1.6□□□□□ -2.15
SMG1-212ENST00000566328 OR2T7P0C7T2 308 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PPARGP37231 505 aaPredicted RBP1.6□□□□□ -2.15
SMG1-212ENST00000566328 OR3A2P47893 321 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 ATP4BP51164 291 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 DNA2P51530 1060 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 ARSEP51690 589 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 KLC1Q07866 573 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 ZNF415Q09FC8 603 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 CRYMQ14894 314 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 TMEM132DQ14C87 1099 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PHKG1Q16816 387 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 UTF1Q5T230 341 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 C11orf63Q6NUN7 778 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 KLHL35Q6PF15 583 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 FCRLAQ7L513 359 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 ADGRD2Q7Z7M1 963 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 SERINC5Q86VE9 423 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 FAM89BQ8N5H3 189 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 CCDC185Q8N715 623 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 OR7A2PQ8NGA2 310 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 CMTM3Q96MX0 182 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 FAM218AQ96MZ4 157 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 APOL2Q9BQE5 337 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PPIL3Q9H2H8 161 aaKnown RBP1.6□□□□□ -2.15
SMG1-212ENST00000566328 PNNQ9H307 717 aaKnown RBP1.6□□□□□ -2.15
SMG1-212ENST00000566328 MYOZ2Q9NPC6 264 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 CLEC5AQ9NY25 188 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 STK26Q9P289 416 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 HACL1Q9UJ83 578 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 PRXQ9BXM0 1461 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 CUL7Q14999 1698 aa1.6□□□□□ -2.15
SMG1-212ENST00000566328 EPRSP07814 1512 aaKnown RBP1.6□□□□□ -2.15
SMG1-212ENST00000566328 POGZQ7Z3K3 1410 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 A0A1W2PR77 199 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 A6NLC8 198 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 SUPT20HL2P0C7V6 817 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 FAM200BP0CF97 657 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 GP1BBP13224 206 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 MYOGP15173 224 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 JAK1P23458 1154 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 LMO2P25791 158 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 ELAVL4P26378 380 aaKnown RBP1.59□□□□□ -2.15
SMG1-212ENST00000566328 GABRA5P31644 462 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 ELK3P41970 407 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 PPM1FP49593 454 aaPredicted RBP1.59□□□□□ -2.15
SMG1-212ENST00000566328 ITGA7Q13683 1181 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 EXT1Q16394 746 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 MARC1Q5VT66 337 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 SPPL2AQ8TCT8 520 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.59□□□□□ -2.15
SMG1-212ENST00000566328 SSMEM1Q8WWF3 244 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 C2orf48Q96LS8 159 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 HNRNPABQ99729 332 aaKnown RBP1.59□□□□□ -2.15
SMG1-212ENST00000566328 OCR1Q9BZK8 76 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 NLGN3Q9NZ94 848 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 R4GN57 208 aa1.59□□□□□ -2.15
SMG1-212ENST00000566328 CFAP65Q6ZU64 1925 aaKnown RBP1.59□□□□□ -2.15
SMG1-212ENST00000566328 KDM5BQ9UGL1 1544 aa1.59□□□□□ -2.16
SMG1-212ENST00000566328 IQGAP2Q13576 1575 aa1.59□□□□□ -2.16
SMG1-212ENST00000566328 DIP2BQ9P265 1576 aa1.59□□□□□ -2.16
SMG1-212ENST00000566328 TDRD6O60522 2096 aaKnown RBP1.59□□□□□ -2.16
SMG1-212ENST00000566328 ZCCHC11Q5TAX3 1644 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 SCAPERQ9BY12 1400 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 YEATS2Q9ULM3 1422 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 PPRC1Q5VV67 1664 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 ADGRL1O94910 1474 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 NUP153P49790 1475 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 CDK13Q14004 1512 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 UGGT2Q9NYU1 1516 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 IGHV3-38A0A0C4DH36 116 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 A0A1W2PQ72 361 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms