RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TSTA3Q13630 321 aaPredicted RBP17.47■□□□□ 0.39
USB1-213ENST00000566292 NAA25Q14CX7 972 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 RBBP7Q16576 425 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 CRB2Q5IJ48 1285 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 ZNF425Q6IV72 752 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 PRMT9Q6P2P2 845 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 CYHR1Q6ZMK1 362 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 Q6ZS92 163 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 CISD2Q8N5K1 135 aaKnown RBP17.47■□□□□ 0.39
USB1-213ENST00000566292 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 FBXO15Q8NCQ5 510 aaPredicted RBP17.47■□□□□ 0.39
USB1-213ENST00000566292 OR11G2Q8NGC1 345 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 STT3BQ8TCJ2 826 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 COG1Q8WTW3 980 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 ZNF480Q8WV37 535 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 ASB11Q8WXH4 323 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 KCNJ9Q92806 393 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 SEMA3GQ9NS98 782 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 ASF1BQ9NVP2 202 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 KLHL42Q9P2K6 505 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 TAC3Q9UHF0 121 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 CSAG2Q9Y5P2 127 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 E7ENX8 843 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 PGRMC1O00264 195 aaKnown RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 ZGLP1P0C6A0 271 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 RNF224P0DH78 156 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 MPC1LP0DKB6 136 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 ERVK-10P10266 1014 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 MPP1Q00013 466 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 TAP2Q03519 686 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 PRDX1Q06830 199 aaKnown RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 Q0VFX4 171 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 LONRF1Q17RB8 773 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 MUM1Q2TAK8 710 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 EIF2S3LQ2VIR3 472 aaKnown RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 TTLL9Q3SXZ7 439 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 TUBB8Q3ZCM7 444 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 ICE2Q659A1 982 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 CUZD1Q86UP6 607 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 PARP9Q8IXQ6 854 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 LRRC56Q8IYG6 542 aaPredicted RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 PRSS58Q8IYP2 241 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 ZADH2Q8N4Q0 377 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 CABS1Q96KC9 395 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 GPR21Q99679 349 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 CRB3Q9BUF7 120 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 ILKAPQ9H0C8 392 aaPredicted RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 LRRC4CQ9HCJ2 640 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 C20orf96Q9NUD7 363 aaPredicted RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 RUVBL1Q9Y265 456 aaKnown RBP17.46■□□□□ 0.39
USB1-213ENST00000566292 DHRS7Q9Y394 339 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 MAD1L1Q9Y6D9 718 aa17.46■□□□□ 0.39
USB1-213ENST00000566292 IGLV3-12A0A075B6K2 115 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 ZNF839A8K0R7 811 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 GFYI3L273 518 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 PHF2O75151 1096 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 HAUS5O94927 633 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 HSD17B2P37059 387 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 EMP3P54852 163 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 OCA2Q04671 838 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 HIF1AQ16665 826 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 HKDC1Q2TB90 917 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 VWA2Q5GFL6 755 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 IGFL2Q6UWQ7 119 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 SLC35F6Q8N357 371 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 CD200R1Q8TD46 325 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 TM9SF4Q92544 642 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 MIEF2Q96C03 454 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 OR2A5Q96R48 311 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 OSBPL9Q96SU4 736 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 NAP1L3Q99457 506 aaPredicted RBP17.45■□□□□ 0.38
USB1-213ENST00000566292 CCDC68Q9H2F9 335 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 ZNF282Q9UDV7 671 aaPredicted RBP17.45■□□□□ 0.38
USB1-213ENST00000566292 FBXO5Q9UKT4 447 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 NTNG1Q9Y2I2 539 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 PCDHGA10Q9Y5H3 936 aa17.45■□□□□ 0.38
USB1-213ENST00000566292 SMAPO00193 183 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 FFAR3O14843 346 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 GPR42O15529 346 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 VPS26AO75436 327 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CBX6O95503 412 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 SYF2O95926 243 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 ENO3P13929 434 aaPredicted RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 FBLP22087 321 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 CARSP49589 748 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 NR6A1Q15406 480 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 HSP90AA5PQ58FG0 334 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 RNASEH2BQ5TBB1 312 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 PIWIL4Q7Z3Z4 852 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 LAPTM4BQ86VI4 370 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 LMNTD2Q8IXW0 634 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 PPIL6Q8IXY8 311 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 ARHGEF39Q8N4T4 335 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CSNK1A1LQ8N752 337 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CALML6Q8TD86 181 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 SSC4DQ8WTU2 575 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 C8orf44Q96CB5 159 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms