RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 KIAA0408Q6ZU52 694 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 SH2D5Q6ZV89 423 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 M1APQ8TC57 530 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 NRTNQ99748 197 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 MAGEB5Q9BZ81 275 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 WWP1Q9H0M0 922 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 CDCP1Q9H5V8 836 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 LRRC19Q9H756 370 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 IKZF3Q9UKT9 509 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 IGHV3-20A0A0C4DH32 117 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 A0A1B0GVL5 298 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 FITM1A5D6W6 292 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SLC16A5O15375 505 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SLC16A3O15427 465 aaKnown RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SSX4O60224 188 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 F13A1P00488 732 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 PDHA1P08559 390 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 C8orf89P0DMQ9 161 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 COL6A2P12110 1019 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 UGT2B7P16662 529 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 CMA1P23946 247 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 MCM3P25205 808 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 ACSF3Q4G176 576 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 FOXD4L5Q5VV16 416 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 LYPD8Q6UX82 237 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 CCBE1Q6UXH8 406 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SLC22A16Q86VW1 577 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 RPS19BP1Q86WX3 136 aaKnown RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 CEP57L1Q8IYX8 460 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 WDTC1Q8N5D0 677 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 BEND7Q8N7W2 519 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 LMO3Q8TAP4 145 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 FOXD4L4Q8WXT5 416 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 KAT5Q92993 513 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SLC35C1Q96A29 364 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 C18orf8Q96DM3 657 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SPATA32Q96LK8 384 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 OR2A14Q96R47 310 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SYT3Q9BQG1 590 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 MED18Q9BUE0 208 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 ZSCAN5AQ9BUG6 496 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 SLITRK2Q9H156 845 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 NOD2Q9HC29 1040 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 NKX1-2Q9UD57 310 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 GDF2Q9UK05 429 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 LIPT1Q9Y234 373 aa9.86□□□□□ -0.83
HDGFL3-204ENST00000563790 HECTD4Q9Y4D8 3996 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 A0A0J9YY10 115 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 MED7O43513 233 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 FZD6O60353 706 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 ERN1O75460 977 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 MED26O95402 600 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 HKR1P10072 659 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 ZSCAN22P10073 491 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 ENDOUP21128 410 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 FBLP22087 321 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 USF1P22415 310 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 FMO4P31512 558 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 PCYT1AP49585 367 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 PMS1P54277 932 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 TAS2R50P59544 299 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 LRMPQ12912 555 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 EXT1Q16394 746 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 TCTE1Q5JU00 501 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 PDPK2PQ6A1A2 396 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 CLEC2AQ6UVW9 174 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 LUZP2Q86TE4 346 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 FLVCR1-AS1Q8TAF5 88 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 HSPBAP1Q96EW2 488 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 ZNF285Q96NJ3 590 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 NUDCD1Q96RS6 583 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 SPATA16Q9BXB7 569 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 TGIF2Q9GZN2 237 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 TFB2MQ9H5Q4 396 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 UNKLQ9H9P5 680 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 PKD2L2Q9NZM6 624 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 WIF1Q9Y5W5 379 aa9.85□□□□□ -0.83
HDGFL3-204ENST00000563790 PINLYPA6NC86 204 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 NDC80O14777 642 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 STX10O60499 249 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 POP7O75817 140 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 GLSO94925 669 aaPredicted RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 SOD3P08294 240 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 DANCRP0C864 163 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 FLT3P36888 993 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 NDUFA8P51970 172 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 PLGLB1Q02325 96 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 CCDC14Q49A88 953 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 ATL3Q6DD88 541 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 CPEB2Q7Z5Q1 589 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 AMIGO1Q86WK6 493 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms