RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 MEP1AQ16819 746 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PLEKHG6Q3KR16 790 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TPRG1Q6ZUI0 275 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SNX29P2Q8IUI4 249 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 NXPE1Q8N323 547 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SVOPLQ8N434 492 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 BEND7Q8N7W2 519 aaPredicted RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 RHOXF1Q8NHV9 184 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ATOH8Q96SQ7 321 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SMAD5Q99717 465 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 CD244Q9BZW8 370 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 VPS4AQ9UN37 437 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 MAP4K5Q9Y4K4 846 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 MAGEB17A8MXT2 336 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 MANBAO00462 879 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SGTAO43765 313 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ATG13O75143 517 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 CCDC159P0C7I6 412 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 C2orf80Q0P641 193 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 RFX4Q33E94 735 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■■■■□ 24
RNF40-204ENST00000563683 PRR23CQ6ZRP0 262 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PAGE2Q7Z2X7 111 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TMEM173Q86WV6 379 aaPredicted RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 POC5Q8NA72 575 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 CD200R1Q8TD46 325 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 HTRA1Q92743 480 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TEX12Q9BXU0 123 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 NEK6Q9HC98 313 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ABCB10Q9NRK6 738 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 DNMT3BQ9UBC3 853 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 OAS3Q9Y6K5 1087 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 DRGXA6NNA5 263 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 CLIC1O00299 241 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 IDH3BO43837 385 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 WASP42768 502 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 IL18R1Q13478 541 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 KANK2Q63ZY3 851 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 FRG2Q64ET8 278 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 AHSA2Q719I0 299 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PGBD3Q8N328 593 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 TCAIMQ8N3R3 496 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 TBC1D19Q8N5T2 526 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 CSGALNACT1Q8TDX6 532 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PPCDCQ96CD2 204 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 OTUB1Q96FW1 271 aaPredicted RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 FRG2BQ96QU4 278 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 TMEM175Q9BSA9 504 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 HTATIP2Q9BUP3 242 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 RIOK2Q9BVS4 552 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 NLNQ9BYT8 704 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 OR2B2Q9GZK3 357 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 TP63Q9H3D4 680 aaPredicted RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 FARSBQ9NSD9 589 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 B4GALT6Q9UBX8 382 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 OGDHLQ9ULD0 1010 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 MROH6A6NGR9 719 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PER2O15055 1255 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 EEDO75530 441 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 UPK1BO75841 260 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 DSC3Q14574 896 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 CARD16Q5EG05 197 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 RSBN1Q5VWQ0 802 aaPredicted RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 CAPN13Q6MZZ7 669 aaPredicted RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 DCP2Q8IU60 420 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 CCDC103Q8IW40 242 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 RIMKLAQ8IXN7 391 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 CRISPLD1Q9H336 500 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 POLE4Q9NR33 117 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 TLR9Q9NR96 1032 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 AASDHPPTQ9NRN7 309 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 NOTOA8MTQ0 251 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 SLC1A7O00341 560 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 STK25O00506 426 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 ERAL1O75616 437 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 OPN1SWP03999 348 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 C8GP07360 202 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 MAGP20916 626 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 FMO3P31513 532 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 SLC16A1P53985 500 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 GP2P55259 537 aaKnown RBP10.16□□□□□ -0.78
RNF40-204ENST00000563683 LMAN2Q12907 356 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 HKDC1Q2TB90 917 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 UGT3A2Q3SY77 523 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 GPRC6AQ5T6X5 926 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 DPY19L3Q6ZPD9 716 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 ADGRG2Q8IZP9 1017 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PROX1Q92786 737 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 VPS35Q96QK1 796 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 DSN1Q9H410 356 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.16□□□□□ -0.78
RNF40-204ENST00000563683 IL17CQ9P0M4 197 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PCDHGB1Q9Y5G3 927 aa10.16□□□□□ -0.78
RNF40-204ENST00000563683 PSME4Q14997 1843 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TAF4O00268 1085 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 ERN1O75460 977 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms