RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SEPHS2Q99611 448 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 MAGEL2Q9UJ55 1249 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 KCNE2Q9Y6J6 123 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 NUP214P35658 2090 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-203ENST00000563226 ARHGAP10A1A4S6 786 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 ACPPP15309 386 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 GGT1P19440 569 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 PTPN6P29350 595 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 E2F2Q14209 437 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 FGL2Q14314 439 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 SYT12Q8IV01 421 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF548Q8NEK5 533 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-203ENST00000563226 OR2T12Q8NG77 320 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 OR7A2PQ8NGA2 310 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 OR5AR1Q8NGP9 310 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 CSGALNACT1Q8TDX6 532 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 NSMCE2Q96MF7 247 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 TBCDQ9BTW9 1192 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 SGPP1Q9BX95 441 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 MAN2B2Q9Y2E5 1009 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 C1QCP02747 245 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 PIM1P11309 404 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 FASP25445 335 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 KIR2DL1P43626 348 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 RAE1P78406 368 aaKnown RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 TAP2Q03519 686 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF33BQ06732 778 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 ADAM15Q13444 863 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 UGT8Q16880 541 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 PYCR3Q53H96 274 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 LRIF1Q5T3J3 769 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 C2orf73Q8N5S3 287 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 C11orf24Q96F05 449 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 CPPED1Q9BRF8 314 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 SLC6A17Q9H1V8 727 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 KCNH6Q9H252 994 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 SPNS1Q9H2V7 528 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 ZFR2Q9UPR6 939 aaKnown RBP18.47■□□□□ 0.55
SMPD3-203ENST00000563226 OR1A2Q9Y585 309 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 PCDHGA11Q9Y5H2 935 aa18.47■□□□□ 0.55
SMPD3-203ENST00000563226 A0A096LPI6 279 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 PDLIM1O00151 329 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 MAP3K13O43283 966 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 AP1G1O43747 822 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CES5AQ6NT32 575 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ZBTB49Q6ZSB9 765 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 AMZ2Q86W34 360 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 C1orf52Q8N6N3 182 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 PAPD5Q8NDF8 572 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CDC26Q8NHZ8 85 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CENPKQ9BS16 269 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ASF1AQ9Y294 204 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ADH1BP00325 375 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 HSPA13P48723 471 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CCT8P50990 548 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CHN2P52757 468 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 PNLIPRP1P54315 467 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 RPS13P62277 151 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 MEF2AQ02078 507 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ACSM2AQ08AH3 577 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 SLBPQ14493 270 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 IRF4Q15306 451 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ACSM2BQ68CK6 577 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CAPRIN2Q6IMN6 1127 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ANKRD26P1Q6NSI1 321 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 PDZD3Q86UT5 571 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 GPR180Q86V85 440 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 FAM9CQ8IZT9 166 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 GPR156Q8NFN8 814 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 FIG4Q92562 907 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 MIEF2Q96C03 454 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 ITCHQ96J02 903 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CCDC115Q96NT0 180 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 REXO4Q9GZR2 422 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 Q9H521 79 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CARS2Q9HA77 564 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 BRF2Q9HAW0 419 aa18.46■□□□□ 0.55
SMPD3-203ENST00000563226 RUVBL1Q9Y265 456 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 CFAP20Q9Y6A4 193 aaKnown RBP18.46■□□□□ 0.55
SMPD3-203ENST00000563226 PRR23AA6NEV1 266 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 ERN1O75460 977 aaKnown RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 ANXA6P08133 673 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 UMPSP11172 480 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 C5AR1P21730 350 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 PLOD1Q02809 727 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 MTAPQ13126 283 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 MED27Q6P2C8 311 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 GCNT7Q6ZNI0 430 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 EP400NLQ6ZTU2 488 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 LRRTM4Q86VH4 590 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 CBR4Q8N4T8 237 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 FAM86B1Q8N7N1 296 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 MKRN2Q9H000 416 aaKnown RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 KAT8Q9H7Z6 458 aaKnown RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 PRM3Q9NNZ6 103 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 GEMIN8Q9NWZ8 242 aaKnown RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 INVSQ9Y283 1065 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 DYRK1BQ9Y463 629 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 H0YJX3 145 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms