RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 SYNE4Q8N205 404 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 PRSS35Q8N3Z0 413 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 LRRC18Q8N456 261 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 SFRP1Q8N474 314 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 STX19Q8N4C7 294 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 LRRC17Q8N6Y2 441 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 YIPF7Q8N8F6 280 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 ZNF557Q8N988 423 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 POMGNT2Q8NAT1 580 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 FAM83FQ8NEG4 500 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 OR5T1Q8NG75 326 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 OR2L3Q8NG85 312 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 OR2L8Q8NGY9 312 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 PHOSPHO1Q8TCT1 267 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 SNX33Q8WV41 574 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 MAFIPQ8WZ33 124 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 MYLPFQ96A32 169 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 TMEM143Q96AN5 459 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 CMTM5Q96DZ9 223 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 YIPF6Q96EC8 236 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 MASTLQ96GX5 879 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 CRELD1Q96HD1 420 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 ZNF514Q96K75 400 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 MRGPRX4Q96LA9 322 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 OR2A14Q96R47 310 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 ZNF300Q96RE9 604 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 TAAR1Q96RJ0 339 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 P2RY13Q9BPV8 354 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 CHCHD6Q9BRQ6 235 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 NT5C1AQ9BXI3 368 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 TRIM54Q9BYV2 358 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 ASPSCR1Q9BZE9 553 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 GSX2Q9BZM3 304 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 MS4A7Q9GZW8 240 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 SDCBP2Q9H190 292 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 RNPEPQ9H4A4 650 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 FAM83DQ9H4H8 585 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 MANSC1Q9H8J5 431 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 KANSL2Q9H9L4 492 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 COPS7BQ9H9Q2 264 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 RNF122Q9H9V4 155 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.82□□□□□ -1.64
TCF4-215ENST00000562638 MBIPQ9NS73 344 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 FAM49BQ9NUQ9 324 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 IMP3Q9NV31 184 aaKnown RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 SLC17A7Q9P2U7 560 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 OPTCQ9UBM4 332 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 METTL1Q9UBP6 276 aaKnown RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 DNAJB9Q9UBS3 223 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 CLEC2DQ9UHP7 191 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 SCP2D1Q9UJQ7 156 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 GPR52Q9Y2T5 361 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 SLC6A5Q9Y345 797 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 USP54Q70EL1 1684 aa4.82□□□□□ -1.64
TCF4-215ENST00000562638 COL22A1Q8NFW1 1626 aaPredicted RBP4.82□□□□□ -1.64
TCF4-215ENST00000562638 MRC1P22897 1456 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SPEF2Q9C093 1822 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SPATA31A1Q5TZJ5 1347 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SPATA31A5Q5VU36 1347 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SPATA31A7Q8IWB4 1347 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 A0A0A0MRY4 1105 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 C2orf92A0A1B0GVN3 265 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SERTM2A0A1B0GWG4 89 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 POM121BA6NF01 834 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 NEMP2A6NFY4 417 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 PP2D1A8MPX8 630 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 E5RI56 91 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 MKRN2OSH3BPM6 223 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 H7C1Q1 480 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 KPNA3O00505 521 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 TPP1O14773 563 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 INSIG1O15503 277 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 DLEU1O43261 78 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 CHP2O43745 196 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 HCN1O60741 890 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SLC43A1O75387 559 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 BANF1O75531 89 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 ITGA10O75578 1167 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SOAT2O75908 522 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SORBS2O94875 1100 aaKnown RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 GADD45GO95257 159 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 AHSA1O95433 338 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 MOCS2O96007 188 aaPredicted RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 ALDH1A1P00352 501 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 GSRP00390 522 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 AVPP01185 164 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 GCP02774 474 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 SNRNP70P08621 437 aaKnown RBP4.81□□□□□ -1.64
TCF4-215ENST00000562638 STAG3L1P0CL83 205 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 CYP2B6P20813 491 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 C5AR1P21730 350 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 FGFR3P22607 806 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 UQCRC2P22695 453 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 CA4P22748 312 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 AHCYP23526 432 aa4.81□□□□□ -1.64
TCF4-215ENST00000562638 ITGA3P26006 1051 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms