RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 FRMPD2BQ6IN97 320 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 FBXO42Q6P3S6 717 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 FIGLAQ6QHK4 219 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 LCTLQ6UWM7 567 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 THOC6Q86W42 341 aaKnown RBP9.4□□□□□ -0.9
CLK3-208ENST00000562626 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 OR4N4Q8N0Y3 316 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ZNF740Q8NDX6 193 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 OR1L3Q8NH93 324 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 RHEBL1Q8TAI7 183 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 STAG3L4Q8TBR4 150 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ACMSDQ8TDX5 336 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 NEIL2Q969S2 332 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ZNF501Q96CX3 271 aaPredicted RBP9.4□□□□□ -0.9
CLK3-208ENST00000562626 SCYL1Q96KG9 808 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 PRAP1Q96NZ9 151 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 CMKLR1Q99788 373 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ROPN1BQ9BZX4 212 aaPredicted RBP9.4□□□□□ -0.9
CLK3-208ENST00000562626 PPCSQ9HAB8 311 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ROPN1Q9HAT0 212 aaPredicted RBP9.4□□□□□ -0.9
CLK3-208ENST00000562626 MRPS30Q9NP92 439 aaKnown RBP9.4□□□□□ -0.9
CLK3-208ENST00000562626 SOHLH2Q9NX45 425 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 WWOXQ9NZC7 414 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 PILRAQ9UKJ1 303 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 ANGPTL2Q9UKU9 493 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 KLK4Q9Y5K2 254 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 B3GALT1Q9Y5Z6 326 aa9.4□□□□□ -0.9
CLK3-208ENST00000562626 CROCCQ5TZA2 2017 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CELSR3Q9NYQ7 3312 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 DMXL2Q8TDJ6 3036 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 A0A0J9YVX5 310 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 A0A1B0GTL3 188 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 A8MT66 165 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 B4E171 279 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 E7EQ34 232 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 G3V2L1 256 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 TMX2-CTNND1H3BSU7 103 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 HAT1O14929 419 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 P2RX6O15547 441 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 DLX3O60479 287 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 ERLIN1O75477 346 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SASH3O75995 380 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 PROCP04070 461 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 JMJD7P0C870 316 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 KRT4P19013 534 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CD22P20273 847 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CMPK1P30085 196 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SLC5A2P31639 672 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 HSD17B2P37059 387 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 TSPAN7P41732 249 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 FOXM1Q08050 763 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CYP4F3Q08477 520 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 TUBB3Q13509 450 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 PFKFB4Q16877 469 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 THEMIS2Q5TEJ8 643 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SULT1C3Q6IMI6 304 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 ADNP2Q6IQ32 1131 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CAPN13Q6MZZ7 669 aaPredicted RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 RNF44Q7L0R7 432 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 TMEM151BQ8IW70 566 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SRRM1Q8IYB3 904 aaKnown RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 RIBC1Q8N443 379 aaPredicted RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 PTGR2Q8N8N7 351 aaPredicted RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 BANPQ8N9N5 519 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SLC38A9Q8NBW4 561 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 UBTD2Q8WUN7 234 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 GRAMD1AQ96CP6 724 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 CABS1Q96KC9 395 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 NSUN5Q96P11 429 aaKnown RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SPRY4Q9C004 299 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 NRSN2Q9GZP1 204 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SPRTNQ9H040 489 aaPredicted RBP9.39□□□□□ -0.91
CLK3-208ENST00000562626 FGF21Q9NSA1 209 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 STARD5Q9NSY2 213 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 SLC17A7Q9P2U7 560 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 PCDHGA8Q9Y5G5 932 aa9.39□□□□□ -0.91
CLK3-208ENST00000562626 URB1O60287 2271 aaKnown RBP9.38□□□□□ -0.91
CLK3-208ENST00000562626 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
CLK3-208ENST00000562626 UQCRHLA0A096LP55 91 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 FEZF1A0PJY2 475 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 TAF4O00268 1085 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 PPP6CO00743 305 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 LCMT2O60294 686 aaKnown RBP9.38□□□□□ -0.91
CLK3-208ENST00000562626 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
CLK3-208ENST00000562626 PLIN3O60664 434 aa9.38□□□□□ -0.91
CLK3-208ENST00000562626 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
CLK3-208ENST00000562626 UQCRHP07919 91 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms