RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ACADMP11310 421 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TNNI3P19429 210 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 POU4F1Q01851 419 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ALDH6A1Q02252 535 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 GALEQ14376 348 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 MAD2L1BPQ15013 274 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ESRP1Q6NXG1 681 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC46A3Q7Z3Q1 461 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 LINC00469Q8N7U9 141 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TTLQ8NG68 377 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC22A4Q9H015 551 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 NIPAL2Q9H841 368 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF224Q9NZL3 707 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 B4DXG7 233 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 E9PAM4 449 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TOR1AO14656 332 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TNFRSF21O75509 655 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 OAZ2O95190 189 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 C1QBP02746 253 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ETV1P50549 477 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 MAXP61244 160 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 CDH17Q12864 832 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 HYAL2Q12891 473 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 DET1Q7L5Y6 550 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 ANKRD49Q8WVL7 239 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 MARC2Q969Z3 335 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 HMX1Q9NP08 348 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 MAN2B2Q9Y2E5 1009 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 MAFKO60675 156 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 TP53P04637 393 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 CHRNA4P43681 627 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 CBX5P45973 191 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 TP53BP2Q13625 1128 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 SETMARQ53H47 684 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 CNTN4Q8IWV2 1026 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 OR8H3Q8N146 312 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 VWA5B2Q8N398 1253 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 FCGR1BQ92637 280 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 KLHL5Q96PQ7 755 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 BARD1Q99728 777 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 TTLL2Q9BWV7 592 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 SCPEP1Q9HB40 452 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 TNFRSF10DQ9UBN6 386 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PCDHB5Q9Y5E4 795 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 LINC00862A6NCI5 91 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 MOXD2PA6NHM9 499 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ANKRD28O15084 1053 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ALPPP05187 535 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 EPHA2P29317 976 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 HERVK_113P63132 956 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ALFQ53S48 1182 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 GARNL3Q5VVW2 1013 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 HIPK1Q86Z02 1210 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PAF1Q8N7H5 531 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 IPCEF1Q8WWN9 437 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ASB15Q8WXK1 588 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 NCLNQ969V3 563 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 RHBDF1Q96CC6 855 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 COQ8BQ96D53 544 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 L3HYPDHQ96EM0 354 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 NSUN5Q96P11 429 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 SIGLEC11Q96RL6 698 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 CYP2S1Q96SQ9 504 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 MYOCQ99972 504 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 COPS4Q9BT78 406 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ERVK-6Q9BXR3 956 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 RNF121Q9H920 327 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 RBM22Q9NW64 420 aaKnown RBP eCLIP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC2A6Q9UGQ3 507 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 BTN3A3O00478 584 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 MRPS14O60783 128 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PQBP1O60828 265 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 B3GALNT1O75752 331 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 EFNA1P20827 205 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 CCL23P55773 120 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 KEAP1Q14145 624 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ZMYND11Q15326 602 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF789Q5FWF6 425 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ARTNQ5T4W7 220 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ZBTB37Q5TC79 503 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PRSS55Q6UWB4 352 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 KIAA1324Q6UXG2 1013 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PHC2Q8IXK0 858 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 TESCQ96BS2 214 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PTERQ96BW5 349 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms