RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	NSMCE1	Q8WV22	266 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	TEKT4	Q8WW24	435 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	SYN2	Q92777	582 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	GRAMD1A	Q96CP6	724 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	PTCD3	Q96EY7	689 aa	Known RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	DTD2	Q96FN9	168 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	SCRN2	Q96FV2	425 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	NUDT22	Q9BRQ3	303 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	FRMD8	Q9BZ67	464 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	STRADB	Q9C0K7	418 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	PHPT1	Q9NRX4	125 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.96	□□□□□ -1.3	1e-6	■■■■■ 34.8
MARK3-223	ENST00000561071	FOXJ2	Q9P0K8	574 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	TES	Q9UGI8	421 aa	Known RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	APPL1	Q9UKG1	709 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	CAPN11	Q9UMQ6	739 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	PHTF1	Q9UMS5	762 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	LOXL2	Q9Y4K0	774 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	SNX13	Q9Y5W8	968 aa		6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	BZW2	Q9Y6E2	419 aa	Known RBP	6.96	□□□□□ -1.3
MARK3-223	ENST00000561071	PIPSL	A2A3N6	862 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	RHPN2P1	A8MT19	583 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071		F5H697	171 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071		F8W8V4	182 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	TMX2-CTNND1	H3BSU7	103 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071		K7ENP7	123 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	PPM1D	O15297	605 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	INPP4B	O15327	924 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	CLDN7	O95471	211 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	EML2	O95834	649 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	SOD1	P00441	154 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	HLA-DQB2	P05538	268 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	ADH4	P08319	380 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	PLA2G2A	P14555	144 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	WT1	P19544	449 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	ITGAL	P20701	1170 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	CD1C	P29017	333 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	CCKBR	P32239	447 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	SERPINB6	P35237	376 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	HSPA9	P38646	679 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	GARS	P41250	739 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	GPR1	P46091	355 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	UCN	P55089	124 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	GALNT2	Q10471	571 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	RAB32	Q13637	225 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	HLX	Q14774	488 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	C16orf72	Q14CZ0	275 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	PAFAH1B3	Q15102	231 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	HADH	Q16836	314 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	ANKRD20A8P	Q5CZ79	823 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	INO80C	Q6PI98	192 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	TMEM108	Q6UXF1	575 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	KDELC2	Q7Z4H8	507 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	VASH2	Q86V25	355 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	BBS5	Q8N3I7	341 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	PQLC3	Q8N755	202 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	OR6C4	Q8NGE1	309 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	OR56A3	Q8NH54	315 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	ARRDC2	Q8TBH0	407 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	ZNF564	Q8TBZ8	553 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	FAM71B	Q8TC56	605 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	RAPGEF5	Q92565	580 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	AP2M1	Q96CW1	435 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	NMD3	Q96D46	503 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	CCNL2	Q96S94	520 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	RIOK2	Q9BVS4	552 aa	Known RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	GSDMC	Q9BYG8	508 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	TBCCD1	Q9NVR7	557 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	TMEM9	Q9P0T7	183 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	NENF	Q9UMX5	172 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	SLC17A4	Q9Y2C5	497 aa		6.95	□□□□□ -1.3
MARK3-223	ENST00000561071	TLN1	Q9Y490	2541 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-223	ENST00000561071		A0A0J9YYE9	177 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071		A0A1W2PQ67	120 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	GOLGA6L19	H0YKK7	550 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	KCNK1	O00180	336 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	KPNA5	O15131	536 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	NUDT21	O43809	227 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	PROSC	O94903	275 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	JCHAIN	P01591	159 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	TRBC1	P01850	177 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	ATP1A1	P05023	1023 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	IVL	P07476	585 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	PPP3CB	P16298	524 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	ACTR1B	P42025	376 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	STC1	P52823	247 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	ACTR1A	P61163	376 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	TPM4	P67936	248 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	CYP4F2	P78329	520 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	ILF3	Q12906	894 aa	Known RBP eCLIP	6.94	□□□□□ -1.3	4e-9	■■■□□ 18.5
MARK3-223	ENST00000561071	BIRC2	Q13490	618 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	TUBB3	Q13509	450 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	MESD	Q14696	234 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	RBM20	Q5T481	1227 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	PIM3	Q86V86	326 aa		6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	C17orf82	Q86X59	251 aa	Predicted RBP	6.94	□□□□□ -1.3
MARK3-223	ENST00000561071	NAGS	Q8N159	534 aa		6.94	□□□□□ -1.3

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