RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 UBE2E3Q969T4 207 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 C11orf24Q96F05 449 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 AURKBQ96GD4 344 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 CNDP2Q96KP4 475 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 HBEGFQ99075 208 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DPEP2Q9H4A9 486 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 TRPV4Q9HBA0 871 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 SERHLQ9NQF3 203 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 SLC25A37Q9NYZ2 338 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 IFT80Q9P2H3 777 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 ZNHIT2Q9UHR6 403 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ADGRE2Q9UHX3 823 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 BTNL2Q9UIR0 455 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 SAMD4AQ9UPU9 718 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 SLC22A14Q9Y267 594 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DLGAP4Q9Y2H0 992 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 FADS3Q9Y5Q0 445 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 KCNE2Q9Y6J6 123 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DNMT3AQ9Y6K1 912 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 H3BM21 787 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 FOXE1O00358 373 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 RFXANKO14593 260 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 TSPAN6O43657 245 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 CREG1O75629 220 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 PGM3O95394 542 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ALBP02768 609 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ABCB1P08183 1280 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 GPX2P18283 190 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 TEAD1P28347 426 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 PTPN6P29350 595 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 HSD17B2P37059 387 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 MAGEA2P43356 314 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 YBX1P67809 324 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 PHEXP78562 749 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 SEMG2Q02383 582 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ACSM2AQ08AH3 577 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 IL18R1Q13478 541 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 VEZF1Q14119 521 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ACOX1Q15067 660 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 SGO1Q5FBB7 561 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 XKR6Q5GH73 641 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 CPZQ66K79 652 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ACSM2BQ68CK6 577 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 CAPN13Q6MZZ7 669 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 TTC33Q6PID6 262 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 TMEM220Q6QAJ8 160 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 LPCAT2Q7L5N7 544 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 DET1Q7L5Y6 550 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 SATL1Q86VE3 508 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 RALGPS2Q86X27 583 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ZDHHC13Q8IUH4 622 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 SYT12Q8IV01 421 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 LAS2Q8IYD9 372 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 ZCCHC7Q8N3Z6 543 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 KRTCAP2Q8N6L1 136 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 NATD1Q8N6N6 113 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 PJA1Q8NG27 643 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 OR10A6Q8NH74 314 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 OR5K1Q8NHB7 308 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 FAM162AQ96A26 154 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 NUS1Q96E22 293 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 NRBF2Q96F24 287 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 SLC47A1Q96FL8 570 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 HDAC8Q9BY41 377 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 CAAP1Q9H8G2 361 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 TRIM39Q9HCM9 518 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 THG1LQ9NWX6 298 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 CXXC1Q9P0U4 656 aaPredicted RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 DEC1Q9P2X7 70 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 RPS6KA6Q9UK32 745 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 WBP11Q9Y2W2 641 aaKnown RBP9.4□□□□□ -0.9
RTF1-206ENST00000560447 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.9
RTF1-206ENST00000560447 FAM149AA5PLN7 773 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 PDLIM1O00151 329 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 UPK1AO00322 258 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 NPC1O15118 1278 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 TPST1O60507 370 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 LILRB5O75023 590 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 EPN2O95208 641 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 ALPLP05186 524 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 THRBP10828 461 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 BMP1P13497 986 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 DDX5P17844 614 aaKnown RBP9.39□□□□□ -0.91
RTF1-206ENST00000560447 IMPA1P29218 277 aa9.39□□□□□ -0.91
RTF1-206ENST00000560447 SERPINB1P30740 379 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms