RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 RUVBL2Q9Y230 463 aaKnown RBP13.46□□□□□ -0.25
TPM1-223ENST00000560445 MAP4K5Q9Y4K4 846 aa13.46□□□□□ -0.25
TPM1-223ENST00000560445 A0A1W2PPV9 198 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 MAP2K7O14733 419 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 CTSVO60911 334 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 SLC16A8O95907 504 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 UMODP07911 640 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 CYC1P08574 325 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 HIST1H2AGP0C0S8 130 aaPredicted RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 ACPPP15309 386 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 HIST1H2ADP20671 130 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 PSMB5P28074 263 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 DSG2Q14126 1118 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 INPP5JQ15735 1006 aaPredicted RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 CCSMST1Q4G0I0 132 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 ADCK2Q7Z695 626 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 PDIK1LQ8N165 341 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 TBC1D19Q8N5T2 526 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 CSNK1A1LQ8N752 337 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 THAP11Q96EK4 314 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 PKP4Q99569 1192 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 SPSB2Q99619 263 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 CCDC177Q9NQR7 707 aaPredicted RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 AGPAT4Q9NRZ5 378 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
TPM1-223ENST00000560445 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
TPM1-223ENST00000560445 DOPEY2Q9Y3R5 2298 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 TNRC6AQ8NDV7 1962 aaKnown RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 GFYI3L273 518 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 SLC16A5O15375 505 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 AGFG2O95081 481 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 MCM3P25205 808 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 GRK3P35626 688 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 SKP1P63208 163 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 CTBP1Q13363 440 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 ELOAQ14241 798 aaKnown RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 CRYMQ14894 314 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 RNASEH2BQ5TBB1 312 aaKnown RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 FAM69BQ5VUD6 431 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 PAQR7Q86WK9 346 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 LRRC39Q96DD0 335 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 SIGLEC10Q96LC7 697 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 CCDC138Q96M89 665 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 GPR21Q99679 349 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 WDR77Q9BQA1 342 aaPredicted RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 LHPPQ9H008 270 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 DRC3Q9H069 523 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 SLC22A11Q9NSA0 550 aa13.44□□□□□ -0.26
TPM1-223ENST00000560445 CUEDC1Q9NWM3 386 aaPredicted RBP13.44□□□□□ -0.26
TPM1-223ENST00000560445 CLEC18AA5D8T8 446 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 E7ENX8 843 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 H0YGG7 62 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 HPP00738 406 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 UQCRHP07919 91 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 OR1D4P47884 311 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 AVPR1BP47901 424 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 ARF3P61204 181 aaPredicted RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 RPS15AP62244 130 aaKnown RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 TAP2Q03519 686 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 RAPSNQ13702 412 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 FAM53BQ14153 422 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 FASTKQ14296 549 aaKnown RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 NIPAL1Q6NVV3 410 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 SUSD1Q6UWL2 747 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 CLEC18BQ6UXF7 455 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 RBMXL3Q8N7X1 1067 aaKnown RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 CLEC18CQ8NCF0 446 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 C2CD4AQ8NCU7 369 aaPredicted RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 STT3BQ8TCJ2 826 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 CD200R1Q8TD46 325 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 PPP4R1Q8TF05 950 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 ZNF480Q8WV37 535 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 ATL1Q8WXF7 558 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 AARSD1Q9BTE6 412 aaKnown RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
TPM1-223ENST00000560445 LRRC4CQ9HCJ2 640 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms