RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 OR56A3Q8NH54 315 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 KCTD4Q8WVF5 259 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 N4BP2L2Q92802 583 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 ACTR5Q9H9F9 607 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 LHX9Q9NQ69 397 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 INTS7Q9NVH2 962 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 DHCR7Q9UBM7 475 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 PCDHB3Q9Y5E6 796 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 PCDHGA4Q9Y5G9 962 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 CCDC88CQ9P219 2028 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 TARM1B6A8C7 271 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 MAP3K7O43318 606 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 FKBP9O95302 570 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 SLU7O95391 586 aaKnown RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 C2P06681 752 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ABHD2P08910 425 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 HIST1H2AGP0C0S8 130 aaPredicted RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 HIST1H2ADP20671 130 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 AP1S2P56377 157 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 VSX2P58304 361 aaPredicted RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 VSNL1P62760 191 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ABHD18Q0P651 414 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ZNF385CQ66K41 422 aaPredicted RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 CCDC81Q6ZN84 652 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 TRMT10CQ7L0Y3 403 aaKnown RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 BPHLQ86WA6 291 aaPredicted RBP17.92■□□□□ 0.46
CASC4-209ENST00000559222 DSELQ8IZU8 1212 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ANKRD7Q92527 254 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 EXT2Q93063 718 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ZUFSPQ96AP4 578 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 NXNL1Q96CM4 212 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 HIST1H2AHQ96KK5 128 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 ZNF285Q96NJ3 590 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 HIST1H2AJQ99878 128 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 TMEM79Q9BSE2 394 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 H2AFJQ9BTM1 129 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 DHRS4Q9BTZ2 278 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 SERTAD3Q9UJW9 196 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 LHX6Q9UPM6 363 aa17.92■□□□□ 0.46
CASC4-209ENST00000559222 PCSK5Q92824 1860 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 H7BY64 318 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 K7ENP7 123 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ZSCAN9O15535 394 aaPredicted RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 INHBAP08476 426 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 CDH1P12830 882 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 NPPBP16860 134 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ITGAXP20702 1163 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 DLSTP36957 453 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 GDF5P43026 501 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 FOXL2P58012 376 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 RPS18P62269 152 aaKnown RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 NFKB2Q00653 900 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 VAC14Q08AM6 782 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ILF2Q12905 390 aaKnown RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 SLC29A2Q14542 456 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 TGFBIQ15582 683 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ATP1A1-AS1Q5TC04 95 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 INO80CQ6PI98 192 aaPredicted RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 FAM198BQ6UWH4 519 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 FRA10AC1Q70Z53 315 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ADCK2Q7Z695 626 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ADAMTSL2Q86TH1 951 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 PLD6Q8N2A8 252 aaKnown RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 MR1Q95460 341 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 CLIP3Q96DZ5 547 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 PRAP1Q96NZ9 151 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 EGFL8Q99944 293 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 SELENOSQ9BQE4 189 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 TRIM54Q9BYV2 358 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 CHST8Q9H2A9 424 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 SPNS1Q9H2V7 528 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ALG9Q9H6U8 611 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 GPN2Q9H9Y4 310 aaPredicted RBP17.91■□□□□ 0.46
CASC4-209ENST00000559222 IRAK4Q9NWZ3 460 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 ASB1Q9Y576 335 aa17.91■□□□□ 0.46
CASC4-209ENST00000559222 EXOC1LA0A1B0GW35 172 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 H0YGG7 62 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 MEN1O00255 615 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 TAPBPO15533 448 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 P2RX6O15547 441 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 CCNDBP1O95273 360 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 SHBGP04278 402 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 CAPN1P07384 714 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 TFEBP19484 476 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 CRABP2P29373 138 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 MSH2P43246 934 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 MAGEA12P43365 314 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 SERPINB8P50452 374 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 ARF3P61204 181 aaPredicted RBP17.9■□□□□ 0.46
CASC4-209ENST00000559222 MEF2AQ02078 507 aaPredicted RBP17.9■□□□□ 0.46
CASC4-209ENST00000559222 DNASE1L3Q13609 305 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 SLC9A5Q14940 896 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 LCTLQ6UWM7 567 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 GPR135Q8IZ08 494 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 ESAMQ96AP7 390 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 RHBDF1Q96CC6 855 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 TSNARE1Q96NA8 513 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 ZFYVE21Q9BQ24 234 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 ZNF358Q9NW07 568 aa17.9■□□□□ 0.46
CASC4-209ENST00000559222 NBEAQ8NFP9 2946 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms