RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MED8Q96G25 268 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 TCTN2Q96GX1 697 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 VPS11Q9H270 941 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 PDE7BQ9NP56 450 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 CCDC177Q9NQR7 707 aaPredicted RBP10.97□□□□□ -0.65
SNX1-204ENST00000559061 THSD1Q9NS62 852 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 ABCF3Q9NUQ8 709 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 TBK1Q9UHD2 729 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 EMCNQ9ULC0 261 aa10.97□□□□□ -0.65
SNX1-204ENST00000559061 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 A0A087WV48 116 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 SRRM3A6NNA2 597 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 TK2O00142 265 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 P2RX6O15547 441 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 KRT38O76015 456 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 KIAA0754O94854 1291 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 FKBP9O95302 570 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 CDH1P12830 882 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 ITPKBP27987 946 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 PCBP4P57723 403 aaKnown RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 CSNK1G2P78368 415 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 ACY1Q03154 408 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 GPS2Q13227 327 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 TSTA3Q13630 321 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 CATSPEREQ5SY80 951 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 CEACAM20Q6UY09 585 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 ZNF517Q6ZMY9 492 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 VN1R4Q7Z5H5 301 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 TBC1D1Q86TI0 1168 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 GPSM1Q86YR5 675 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 MCATQ8IVS2 390 aaKnown RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 RAB42Q8N4Z0 105 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 ABHD11Q8NFV4 315 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 OR4K1Q8NGD4 311 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 RHEBL1Q8TAI7 183 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 UBTD2Q8WUN7 234 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 EXT2Q93063 718 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 NKD1Q969G9 470 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 NEIL2Q969S2 332 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 ZUFSPQ96AP4 578 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 CRELD1Q96HD1 420 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 OR2A5Q96R48 311 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 RUFY1Q96T51 708 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 NMRAL1Q9HBL8 299 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 MRPS30Q9NP92 439 aaKnown RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 STARD5Q9NSY2 213 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 PCMTD2Q9NV79 361 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 AKAP7Q9P0M2 348 aaPredicted RBP10.96□□□□□ -0.65
SNX1-204ENST00000559061 RARRES3Q9UL19 164 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 SLC22A14Q9Y267 594 aa10.96□□□□□ -0.65
SNX1-204ENST00000559061 URB1O60287 2271 aaKnown RBP10.96□□□□□ -0.66
SNX1-204ENST00000559061 FITM1A5D6W6 292 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 SMIM23A6NLE4 172 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ZNF839A8K0R7 811 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 H7BY64 318 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 GOLGA8RI6L899 631 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 CTIFO43310 598 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 STATHP02808 62 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 NTRK1P04629 796 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ANXA5P08758 320 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 HIST1H2AGP0C0S8 130 aaPredicted RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 CD22P20273 847 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 HIST1H2ADP20671 130 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 F8A1P23610 371 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 CMPK1P30085 196 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 BCL6P41182 706 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 HSPA7P48741 367 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 MEF2AQ02078 507 aaPredicted RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 ZNF844Q08AG5 666 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ACAP2Q15057 778 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 PRTGQ2VWP7 1150 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 TAF1BQ53T94 588 aaPredicted RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 CDKL4Q5MAI5 379 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 CAPN13Q6MZZ7 669 aaPredicted RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 CCDC91Q7Z6B0 441 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 VASH2Q86V25 355 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 THOC6Q86W42 341 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 PPP1R3BQ86XI6 285 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 SPACA3Q8IXA5 215 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 GALNT6Q8NCL4 622 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ZNF740Q8NDX6 193 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 MTBPQ96DY7 904 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 C10orf90Q96M02 699 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 TSNARE1Q96NA8 513 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 PRAP1Q96NZ9 151 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 TEFMQ96QE5 360 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 AICDAQ9GZX7 198 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 C12orf65Q9H3J6 166 aaKnown RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 NUDT4Q9NZJ9 180 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 TMEM216Q9P0N5 145 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ANKMY1Q9P2S6 941 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 XPR1Q9UBH6 696 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 LGALS13Q9UHV8 139 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 RNF112Q9ULX5 631 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms