RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 PNPLA3Q9NST1 481 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 DNAJC11Q9NVH1 559 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TAAR2Q9P1P5 351 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TXNDC16Q9P2K2 825 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 FETUBQ9UGM5 382 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 NOCTQ9UK39 431 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 GMEB2Q9UKD1 530 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 POU2F3Q9UKI9 436 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 STUB1Q9UNE7 303 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 KCNK6Q9Y257 313 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 KLK4Q9Y5K2 254 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 KIAA1217Q5T5P2 1943 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 GPRASP1Q5JY77 1395 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 IGLV5-45A0A087WSX0 123 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 A0A0B4J203 849 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LOC101059948A0A1B0GTJ6 334 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 A0A1W2PPI3 338 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ANKRD61A6NGH8 418 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 MYMKA6NI61 221 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LACTBL1A8MY62 500 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 PRR32B1ATL7 298 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 H3BMM5 538 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ZNF197O14709 1029 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ARPC2O15144 300 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SLC22A2O15244 555 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ACSL4O60488 711 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 RNASEH1O60930 286 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 BCAS2O75934 225 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 OAZ2O95190 189 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LUC7L3O95232 432 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 BAG2O95816 211 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 NGFP01138 241 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 TSHBP01222 138 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SP9P0CG40 484 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 F3P13726 295 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 DAOP14920 347 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 GOT1P17174 413 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 VCLP18206 1134 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LHCGRP22888 699 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 PIK3R1P27986 724 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SSTR1P30872 391 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SLC6A6P31641 620 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SOAT1P35610 550 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 IL15P40933 162 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 CASP3P42574 277 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 CDX1P47902 265 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 THBS3P49746 956 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 VAMP7P51809 220 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SMSP52788 366 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ART1P52961 327 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 DVL1P1P54792 670 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 SLC12A3P55017 1021 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SNU13P55769 128 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 BPIFB3P59826 476 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 EEF1A1P68104 462 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 ZXDBP98169 803 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ILF2Q12905 390 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 CBX3Q13185 183 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 KIR2DS3Q14952 304 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 MORF4L2Q15014 288 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SGCBQ16585 318 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ODF4Q2M2E3 257 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 KIF19Q2TAC6 998 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 C2orf76Q3KRA6 126 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 FAM174BQ3ZCQ3 159 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 GPR33Q49SQ1 333 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ZNF585BQ52M93 769 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 IFI44LQ53G44 452 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 CCDC92Q53HC0 331 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 PDSS1Q5T2R2 415 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 EEF1A1P5Q5VTE0 462 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LYSMD4Q5XG99 296 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 PM20D1Q6GTS8 502 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 NADSYN1Q6IA69 706 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 OR4C11Q6IEV9 310 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 OR4A47Q6IF82 309 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 TTC27Q6P3X3 843 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 NOTUMQ6P988 496 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ZNF449Q6P9G9 518 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 C5orf24Q7Z6I8 188 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 ZNF554Q86TJ5 538 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SERPINA12Q8IW75 414 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 GPALPP1Q8IXQ4 340 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 PEX5LQ8IYB4 626 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 DCP1BQ8IZD4 617 aaKnown RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 CLYBLQ8N0X4 340 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 AMER3Q8N944 861 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 SMYD1Q8NB12 490 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 POC1AQ8NBT0 407 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 KCNH5Q8NCM2 988 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LPCAT1Q8NF37 534 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 OR8H1Q8NGG4 311 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 OR52N5Q8NH56 324 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 LRRC8CQ8TDW0 803 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 PHLDA1Q8WV24 401 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 NUDCD2Q8WVJ2 157 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 FCAMRQ8WWV6 532 aa1.5□□□□□ -2.17
USP3-209ENST00000558925 TSACCQ96A04 125 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 SENP5Q96HI0 755 aaPredicted RBP1.5□□□□□ -2.17
USP3-209ENST00000558925 IGSF21Q96ID5 467 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms