RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CNTRLQ7Z7A1 2325 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 HYKKA2RU49 373 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 VSTM2BA6NLU5 285 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 AGPSO00116 658 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 PEX12O00623 359 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 SOCS6O14544 535 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 FANCGO15287 622 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 DPM1O60762 260 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 CCNDBP1O95273 360 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 ERVK-10P10266 1014 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 RELAQ04206 551 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 PRDX1Q06830 199 aaKnown RBP16.24■□□□□ 0.19
LRRC28-210ENST00000558879 MYBPC3Q14896 1274 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 MORF4L2Q15014 288 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 LRRC8EQ6NSJ5 796 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 FBXO42Q6P3S6 717 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 KIAA0408Q6ZU52 694 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 SYDE1Q6ZW31 735 aaPredicted RBP16.24■□□□□ 0.19
LRRC28-210ENST00000558879 IGDCC3Q8IVU1 814 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 GALNT16Q8N428 558 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 ARHGEF39Q8N4T4 335 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 RBMXL3Q8N7X1 1067 aaKnown RBP16.24■□□□□ 0.19
LRRC28-210ENST00000558879 CERS2Q96G23 380 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 HS3ST3B1Q9Y662 390 aa16.24■□□□□ 0.19
LRRC28-210ENST00000558879 LRRK2Q5S007 2527 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 HECTD1Q9ULT8 2610 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 IGLV3-12A0A075B6K2 115 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 H0YGG7 62 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 SMAPO00193 183 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 TP73O15350 636 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 EZRP15311 586 aaKnown RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 OR1D4P47884 311 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 ARF3P61204 181 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 ABATP80404 500 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 MUM1Q2TAK8 710 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 RBM20Q5T481 1227 aaKnown RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 STEAP4Q687X5 459 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 SLC6A19Q695T7 634 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 HIBCHQ6NVY1 386 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 JMJD6Q6NYC1 403 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 PRMT9Q6P2P2 845 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 METTL27Q8N6F8 245 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 CLEC1AQ8NC01 280 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 GABPB2Q8TAK5 448 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 MVB12AQ96EY5 273 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 CAPZA3Q96KX2 299 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 RUNDC3BQ96NL0 473 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 OR2A5Q96R48 311 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 NDNQ99608 321 aa16.23■□□□□ 0.19
LRRC28-210ENST00000558879 ZNF552Q9H707 407 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 ZC3H7BQ9UGR2 993 aaKnown RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 USP9XQ93008 2570 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-210ENST00000558879 RP1L1Q8IWN7 2480 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 A6NL46 340 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 MASP2O00187 686 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 ZBTB14O43829 449 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 AHSGP02765 367 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 TBPL1P62380 186 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 SRSF1Q07955 248 aaKnown RBP eCLIP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 SP140Q13342 867 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 BBS9Q3SYG4 887 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 UGT3A1Q6NUS8 523 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 IGFL3Q6UXB1 125 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 UBE2R2Q712K3 238 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 PNPLA2Q96AD5 504 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 LRRC39Q96DD0 335 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 NAPGQ99747 312 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 TRIM51Q9BSJ1 452 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 SOX17Q9H6I2 414 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 ZNF304Q9HCX3 659 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 CUEDC1Q9NWM3 386 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 TAS2R13Q9NYV9 303 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 STOX2Q9P2F5 926 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 SLC17A6Q9P2U8 582 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 TRMT6Q9UJA5 497 aaKnown RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 FBXL4Q9UKA2 621 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 ADAMTS6Q9UKP5 1117 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 PYCARDQ9ULZ3 195 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 RUVBL1Q9Y265 456 aaKnown RBP16.22■□□□□ 0.19
LRRC28-210ENST00000558879 TEX264Q9Y6I9 313 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 MAU2Q9Y6X3 613 aa16.22■□□□□ 0.19
LRRC28-210ENST00000558879 CCDC188H7C350 402 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 HAT1O14929 419 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 P2RX6O15547 441 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 TSPAN12O95859 305 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 SYF2O95926 243 aaKnown RBP16.21■□□□□ 0.19
LRRC28-210ENST00000558879 ELK3P41970 407 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 CDKN2DP55273 166 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 GNG11P61952 73 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 DR1Q01658 176 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 TSTA3Q13630 321 aaPredicted RBP16.21■□□□□ 0.19
LRRC28-210ENST00000558879 RAPSNQ13702 412 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 HKDC1Q2TB90 917 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 KLHL7Q8IXQ5 586 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 PDIK1LQ8N165 341 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 CPT1CQ8TCG5 803 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 STT3BQ8TCJ2 826 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 EEF1AKMT1Q8WVE0 214 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 PWWP2AQ96N64 755 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms