RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CASC4Q6P4E1 433 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 IGFL2Q6UWQ7 119 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 MBOAT1Q6ZNC8 495 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 PIWIL4Q7Z3Z4 852 aaKnown RBP12.91□□□□□ -0.34
VPS18-203ENST00000558855 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 IQCKQ8N0W5 287 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 TTC29Q8NA56 475 aaPredicted RBP12.91□□□□□ -0.34
VPS18-203ENST00000558855 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 PRR7Q8TB68 274 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 CD200R1Q8TD46 325 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 MAIP1Q8WWC4 291 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 SIGLEC10Q96LC7 697 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 TCF12Q99081 682 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 BARD1Q99728 777 aaKnown RBP12.91□□□□□ -0.34
VPS18-203ENST00000558855 ZFYVE21Q9BQ24 234 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 CRB3Q9BUF7 120 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 ZNF304Q9HCX3 659 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
VPS18-203ENST00000558855 CELSR2Q9HCU4 2923 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 IGLV3-12A0A075B6K2 115 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 FAM237BA0A1B0GVD1 139 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 E7ENX8 843 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 FKBP9O95302 570 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 IMPA1P29218 277 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 CMPK1P30085 196 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 CCNFP41002 786 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 PNLIPRP1P54315 467 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 TAP2Q03519 686 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 SRSF11Q05519 484 aaKnown RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 RBBP7Q16576 425 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 ZXDCQ2QGD7 858 aaPredicted RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 TUBB8Q3ZCM7 444 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 RNF187Q5TA31 235 aaPredicted RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 ICE2Q659A1 982 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 FAAH2Q6GMR7 532 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 TTC23LQ6PF05 361 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 PRSS41Q7RTY9 318 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 SDCCAG8Q86SQ7 713 aaPredicted RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 CATSPER1Q8NEC5 780 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 PSMF1Q92530 271 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 OR2A5Q96R48 311 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 GPR21Q99679 349 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 MACROD1Q9BQ69 325 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 ILKAPQ9H0C8 392 aaPredicted RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 PCYOX1Q9UHG3 505 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 G3BP2Q9UN86 482 aaKnown RBP12.9□□□□□ -0.34
VPS18-203ENST00000558855 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
VPS18-203ENST00000558855 GOLGA6L6A8MZA4 724 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 SRPX2O60687 465 aaPredicted RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 JRKO75564 520 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 HAUS5O94927 633 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 LDLRP01130 860 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 CD63P08962 238 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 COX6A1P12074 109 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 GABRB3P28472 473 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 GLRBP48167 497 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 EEF1A2Q05639 463 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 CSNK1A1LQ8N752 337 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 MCUQ8NE86 351 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 ASB11Q8WXH4 323 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 THOC3Q96J01 351 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 CCDC138Q96M89 665 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 FOPNLQ96NB1 174 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 NDNQ99608 321 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 WDR77Q9BQA1 342 aaPredicted RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 WDR83Q9BRX9 315 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 MRPS30Q9NP92 439 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 INTS10Q9NVR2 710 aaKnown RBP12.89□□□□□ -0.35
VPS18-203ENST00000558855 C3orf18Q9UK00 162 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 DOPEY1Q5JWR5 2465 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 CNTRLQ7Z7A1 2325 aa12.89□□□□□ -0.35
VPS18-203ENST00000558855 SVILO95425 2214 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 A0A0A6YYC8 382 aaPredicted RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 WIPF3A6NGB9 483 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 E5RI56 91 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 H3BMM5 538 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 I3L1I5 382 aaPredicted RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 GFYI3L273 518 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 SMAPO00193 183 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms