RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 MORF4L2Q15014 288 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 HIF1AQ16665 826 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 TCTE1Q5JU00 501 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 ARMC3Q5W041 872 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 ICE2Q659A1 982 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 MRPL14Q6P1L8 145 aaKnown RBP11.96□□□□□ -0.49
SMAD3-208ENST00000558827 NEK10Q6ZWH5 1172 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 OVCH1Q7RTY7 1134 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PAQR7Q86WK9 346 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 SHISA5Q8N114 240 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 AMER2Q8N7J2 671 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 OR2Y1Q8NGV0 311 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PTERQ96BW5 349 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PRAP1Q96NZ9 151 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 ZFYVE21Q9BQ24 234 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 P4HTMQ9NXG6 502 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 CDC23Q9UJX2 597 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 ANAPC2Q9UJX6 822 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 SH2B3Q9UQQ2 575 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PDE10AQ9Y233 779 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PRRC2CQ9Y520 2896 aaKnown RBP11.95□□□□□ -0.5
SMAD3-208ENST00000558827 SEC31AO94979 1220 aaKnown RBP11.95□□□□□ -0.5
SMAD3-208ENST00000558827 TTC4O95801 387 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 ERGP11308 486 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 ENO3P13929 434 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-208ENST00000558827 IMPA1P29218 277 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 CSRP3P50461 194 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 ARL4CP56559 192 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 PRDX1Q06830 199 aaKnown RBP11.95□□□□□ -0.5
SMAD3-208ENST00000558827 NAE1Q13564 534 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 NKG7Q16617 165 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 FAM214AQ32MH5 1076 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 HECTD2Q5U5R9 776 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 FAAH2Q6GMR7 532 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 RNF44Q7L0R7 432 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 LRRC56Q8IYG6 542 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-208ENST00000558827 CSNK1A1LQ8N752 337 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 FBXO36Q8NEA4 188 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 SNF8Q96H20 258 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 C10orf90Q96M02 699 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF285Q96NJ3 590 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 OLFM1Q99784 485 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 C17orf62Q9BQA9 187 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 DHRS4Q9BTZ2 278 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 TAS2R13Q9NYV9 303 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 MAP10Q9P2G4 905 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 PSAT1Q9Y617 370 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 TEX264Q9Y6I9 313 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 FLNCQ14315 2725 aa11.95□□□□□ -0.5
SMAD3-208ENST00000558827 HECTD1Q9ULT8 2610 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 DOCK10Q96BY6 2186 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 TP73O15350 636 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 P2RX6O15547 441 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 SRPX2O60687 465 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 CASQ1P31415 396 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 RGS4P49798 205 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF460Q14592 562 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 ARHGAP19Q14CB8 494 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PHKG1Q16816 387 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 SYT16Q17RD7 645 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 VWA2Q5GFL6 755 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF425Q6IV72 752 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 UGT3A1Q6NUS8 523 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 SYT10Q6XYQ8 523 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 SYDE1Q6ZW31 735 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 MED25Q71SY5 747 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PALM2Q8IXS6 379 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 MYO1HQ8N1T3 1032 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 MCOLN3Q8TDD5 553 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 UNKQ9C0B0 810 aaKnown RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 ZBTB20Q9HC78 741 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF304Q9HCX3 659 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 UTP6Q9NYH9 597 aaKnown RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 GPR83Q9NYM4 423 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 KLHL42Q9P2K6 505 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 FBXL4Q9UKA2 621 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 VWA7Q9Y334 891 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 MRPS2Q9Y399 296 aaKnown RBP11.94□□□□□ -0.5
SMAD3-208ENST00000558827 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
SMAD3-208ENST00000558827 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
SMAD3-208ENST00000558827 A0A0A6YYC8 382 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-208ENST00000558827 FEZF1A0PJY2 475 aa11.93□□□□□ -0.5
SMAD3-208ENST00000558827 FITM1A5D6W6 292 aa11.93□□□□□ -0.5
SMAD3-208ENST00000558827 ZNF839A8K0R7 811 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms