RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-207ENST00000558763 COL25A1Q9BXS0 654 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-207ENST00000558763 TRIM8Q9BZR9 551 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 PCDHAC1Q9H158 963 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 IL1RL2Q9HB29 575 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 GPRC5BQ9NZH0 403 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 LRP4O75096 1905 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 CCDC154A6NI56 674 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 NDUFS2O75306 463 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 SEC22BO75396 215 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TCN1P20061 433 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TACR1P25103 407 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 DGKQP52824 942 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 AP2B1P63010 937 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 BMP8AQ7Z5Y6 402 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TRIM69Q86WT6 500 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 SCARF2Q96GP6 870 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 IL17FQ96PD4 163 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 TACO1Q9BSH4 297 aaKnown RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 CLMPQ9H6B4 373 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 HEATR5BQ9P2D3 2071 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-207ENST00000558763 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 PLXND1Q9Y4D7 1925 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
SMAD3-207ENST00000558763 DYTNA2CJ06 578 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 IFRD1O00458 451 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 KMOO15229 486 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ETHE1O95571 254 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 TDGF1P13385 188 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ACPPP15309 386 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 BCKDHBP21953 392 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 AVPR2P30518 371 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 HNF4AP41235 474 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PNLIPRP1P54315 467 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ZNF33BQ06732 778 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CSTF3Q12996 717 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 KIAA0895LQ68EN5 471 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 GALNT13Q8IUC8 556 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 DCUN1D3Q8IWE4 304 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 KBTBD2Q8IY47 623 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PHC3Q8NDX5 983 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ASB12Q8WXK4 309 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 TFGQ92734 400 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CMTM7Q96FZ5 175 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 NMRK1Q9NWW6 199 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 EIF3LQ9Y262 564 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ASF1AQ9Y294 204 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 WDR37Q9Y2I8 494 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 MAP3K13O43283 966 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 HSD17B1P14061 328 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 AMD1P17707 334 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 SDC1P18827 310 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PHC1P78364 1004 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CATSPEREQ5SY80 951 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 OR7G3Q8NG95 312 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 OR5K2Q8NHB8 316 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 APOOQ9BUR5 198 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 C1QTNF7Q9BXJ2 289 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 SPNS1Q9H2V7 528 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 C11orf16Q9NQ32 467 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 MRPL40Q9NQ50 206 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CA5BQ9Y2D0 317 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 PLEKHM1Q9Y4G2 1056 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
SMAD3-207ENST00000558763 KCNE2Q9Y6J6 123 aa12.5□□□□□ -0.41
SMAD3-207ENST00000558763 POM121BA6NF01 834 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 LATO43561 262 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 DNAJA2O60884 412 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 C8BP07358 591 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ACP5P13686 325 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 RPL10P27635 214 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 HOXA6P31267 233 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 VHLP40337 213 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CLDN2P57739 230 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms