RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ZUFSPQ96AP4 578 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 SCYL1Q96KG9 808 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 GPR78Q96P69 363 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 OR4K3Q96R72 315 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 ATOH8Q96SQ7 321 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 B3GNT4Q9C0J1 378 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 CHRNA10Q9GZZ6 450 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 EURLQ9NYK6 297 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 NUDT4Q9NZJ9 180 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 PLCL2Q9UPR0 1127 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 KLK4Q9Y5K2 254 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 HAT1O14929 419 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 RAD1O60671 282 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SCRG1O75711 98 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 OR2B3O76000 313 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 WDR47O94967 919 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 MT-ND3P03897 115 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 TUBBP07437 444 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 NUDT17P0C025 328 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 MSL3P1P0C860 447 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 PYGBP11216 843 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 NPPBP16860 134 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 CD82P27701 267 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 HSPA7P48741 367 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 HNMTP50135 292 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 CLN3Q13286 438 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 ACAP2Q15057 778 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SULT1C3Q6IMI6 304 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 FRMPD2BQ6IN97 320 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 ZNF425Q6IV72 752 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 LCTLQ6UWM7 567 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 TIPARPQ7Z3E1 657 aaKnown RBP13.75□□□□□ -0.21
USP3-205ENST00000557884 PAQR7Q86WK9 346 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 TDRPQ86YL5 185 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 MREGQ8N565 214 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 OR8K5Q8NH50 307 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 MZB1Q8WU39 189 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 TMEM79Q9BSE2 394 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 STARD5Q9NSY2 213 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SERTAD3Q9UJW9 196 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 PILRAQ9UKJ1 303 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 ACSL6Q9UKU0 697 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 SLC22A14Q9Y267 594 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 DYRK1BQ9Y463 629 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 CFAP47Q6ZTR5 3102 aa13.75□□□□□ -0.21
USP3-205ENST00000557884 DSPP15924 2871 aaKnown RBP13.75□□□□□ -0.21
USP3-205ENST00000557884 LOC105369274A0A096LPK9 316 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 LOC102723532A0A0G2JNH3 316 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 A0A1W2PPM1 405 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 SYCE1LA8MT33 242 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 E7EQ34 232 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 RRP8O43159 456 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 KLK10O43240 276 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 DLGAP3O95886 979 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 STATHP02808 62 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 EIF2S1P05198 315 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 LIPCP11150 499 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 GFAPP14136 432 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 KRT15P19012 456 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 EIF2S3P41091 472 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 SLC6A12P48065 614 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 AGTR2P50052 363 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 SRSF6Q13247 344 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 NAA25Q14CX7 972 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 TECRLQ5HYJ1 363 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 ZC3H12BQ5HYM0 836 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 FBXO42Q6P3S6 717 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 RNF44Q7L0R7 432 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 VASH2Q86V25 355 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 BPHLQ86WA6 291 aaPredicted RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 OR4N4Q8N0Y3 316 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 TCAIMQ8N3R3 496 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 ZNF655Q8N720 491 aaPredicted RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 SNX31Q8N9S9 440 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 PDPRQ8NCN5 879 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 RHEBL1Q8TAI7 183 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 CABS1Q96KC9 395 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 ZFYVE21Q9BQ24 234 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 SPRY4Q9C004 299 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 SLC7A5P2Q9GIP4 190 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 SYNPO2LQ9H987 977 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 PPCSQ9HAB8 311 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 ANKMY1Q9P2S6 941 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 XPR1Q9UBH6 696 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 PLAAQ9Y263 795 aa13.74□□□□□ -0.21
USP3-205ENST00000557884 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
USP3-205ENST00000557884 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms