RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRIM64A6NGJ6 449 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TRIM64BA6NI03 449 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PLK4O00444 970 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 HDAC3O15379 428 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 KRT86O43790 486 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CLN5O75503 358 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 C9P02748 559 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ATP6V1B1P15313 513 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ERCC2P18074 760 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ATP5DP30049 168 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ETV1P50549 477 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 HADHBP55084 474 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 BASP1P80723 227 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 KLHL30Q0D2K2 578 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SNX1Q13596 522 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 KRT81Q14533 505 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TEAD2Q15562 447 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TRADDQ15628 312 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MEP1BQ16820 701 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 C1orf141Q5JVX7 400 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 WLSQ5T9L3 541 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TXNRD3NBQ6F5E7 133 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 KDELC1Q6UW63 502 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 C6orf89Q6UWU4 347 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 LINC00696Q6ZRV3 163 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PIWIL4Q7Z3Z4 852 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 BNIPLQ7Z465 357 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SLC9B2Q86UD5 537 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM173Q86WV6 379 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 OR2AJ1Q8NGZ0 328 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FAM81AQ8TBF8 368 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 GRAPLQ8TC17 118 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TMED6Q8WW62 240 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 TCP11Q8WWU5 503 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 RAD54LQ92698 747 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SPSB1Q96BD6 273 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MTERF3Q96E29 417 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PSKH2Q96QS6 385 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CSF3RQ99062 836 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CGREF1Q99674 301 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 OLFM1Q99784 485 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CPNE1Q99829 537 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 UQCC2Q9BRT2 126 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 DESI2Q9BSY9 194 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 UBQLN3Q9H347 655 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FZD8Q9H461 694 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ACTL8Q9H568 366 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 LMAN1LQ9HAT1 526 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MIOSQ9NXC5 875 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SLCO1C1Q9NYB5 712 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 LCMT1Q9UIC8 334 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 RALYQ9UKM9 306 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MTUS1Q9ULD2 1270 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.59□□□□□ -2.167e-8■■■■■ 31
HIF1A-212ENST00000557538 GMEB1Q9Y692 573 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 NPATQ14207 1427 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PCDH11YQ9BZA8 1340 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SAA2-SAA4A0A096LPE2 208 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 A0A1B0GUL7 405 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PRSS51A0A1B0GVH4 220 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 A0A1W2PPK0 400 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OOEPA6NGQ2 149 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SDR42E2A6NKP2 422 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TMCO5BA8MYB1 307 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 AP3B1O00203 1094 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GAPDHSO14556 408 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PRKRAO75569 313 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CELF2O95319 508 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OPN1MWP04001 364 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OPN1MW2P0DN77 364 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OPN1MW3P0DN78 364 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 IGHV4-31P0DP07 118 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 MYOGP15173 224 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PDGFRAP16234 1089 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CD22P20273 847 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 DGKAP23743 735 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GNL1P36915 607 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 HSD17B3P37058 310 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 FRKP42685 505 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CCR10P46092 362 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GPX6P59796 221 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SLMAPQ14BN4 828 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 INAQ16352 499 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CEP55Q53EZ4 464 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SUSD4Q5VX71 490 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SLC27A1Q6PCB7 646 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 COMMD2Q86X83 199 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 C4orf19Q8IY42 314 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 RASGEF1AQ8N9B8 481 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CAMKVQ8NCB2 501 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OR8K1Q8NGG5 319 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OR52N5Q8NH56 324 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 KIAA1524Q8TCG1 905 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 RNF128Q8TEB7 428 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SSMEM1Q8WWF3 244 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM190Q8WZ59 177 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 NEUROG1Q92886 237 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PTERQ96BW5 349 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 C11orf24Q96F05 449 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 NRBF2Q96F24 287 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms