RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RAB6BQ9NRW1 208 aa13.4□□□□□ -0.26
SLIRP-210ENST00000557431 ANAPC5Q9UJX4 755 aa13.4□□□□□ -0.26
SLIRP-210ENST00000557431 C2CD3Q4AC94 2353 aa13.4□□□□□ -0.26
SLIRP-210ENST00000557431 PDZD2O15018 2839 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 FBN2P35556 2912 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 IGHV1-45A0A0A0MS14 117 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 DYTNA2CJ06 578 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 TARM1B6A8C7 271 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 CCL21O00585 134 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 P2RX6O15547 441 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 SRPX2O60687 465 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 SUN1O94901 812 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 GAS8O95995 478 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 TERF1P54274 439 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 PCOLCEQ15113 449 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 OASLQ15646 514 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 PRTGQ2VWP7 1150 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 RPUSD3Q6P087 351 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 TTC23LQ6PF05 361 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 PLD3Q8IV08 490 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 AMER3Q8N944 861 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 PPHLN1Q8NEY8 458 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 COG1Q8WTW3 980 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 MMABQ96EY8 250 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 ZFYVE21Q9BQ24 234 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 RAB11FIP5Q9BXF6 653 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 GNPTGQ9UJJ9 305 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 MRPS2Q9Y399 296 aaKnown RBP13.39□□□□□ -0.27
SLIRP-210ENST00000557431 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 HCFC1P51610 2035 aa13.39□□□□□ -0.27
SLIRP-210ENST00000557431 IGLV3-12A0A075B6K2 115 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 A0A0A6YYC8 382 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-210ENST00000557431 TRAV17A0A0B4J275 112 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 IGKV1-8A0A0C4DH67 115 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 OR2W5A6NFC9 320 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 BTNL10A8MVZ5 291 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 F8W8V4 182 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 I3L1I5 382 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-210ENST00000557431 LIASO43766 372 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 USP1O94782 785 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 HEXBP07686 556 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 APRTP07741 180 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 FMO4P31512 558 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 FDFT1P37268 417 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 CDSNQ15517 529 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 PRMT9Q6P2P2 845 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 LRRC8BQ6P9F7 803 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 LANCL3Q6ZV70 420 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 NEK10Q6ZWH5 1172 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 MRGPRGQ86SM5 289 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 CSNK1A1LQ8N752 337 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 RELTQ969Z4 430 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 MOCOSQ96EN8 888 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 PANX3Q96QZ0 392 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 HES7Q9BYE0 225 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 TSPAN10Q9H1Z9 355 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-210ENST00000557431 MRPS30Q9NP92 439 aaKnown RBP13.38□□□□□ -0.27
SLIRP-210ENST00000557431 IL1RAPL1Q9NZN1 696 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 TAC3Q9UHF0 121 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 ITGB1BP2Q9UKP3 347 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF148Q9UQR1 794 aa13.38□□□□□ -0.27
SLIRP-210ENST00000557431 INTS1Q8N201 2190 aaKnown RBP13.37□□□□□ -0.27
SLIRP-210ENST00000557431 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
SLIRP-210ENST00000557431 ARHGEF33A8MVX0 844 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 FOXS1O43638 330 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 NDUFS3O75489 264 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 WFS1O76024 890 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 IPO7O95373 1038 aaKnown RBP13.37□□□□□ -0.27
SLIRP-210ENST00000557431 SERPINA7P05543 415 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 CXCR2P25025 360 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 ARNTP27540 789 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 CMPK1P30085 196 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 PAQR7Q86WK9 346 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
SLIRP-210ENST00000557431 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 HAS2Q92819 552 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 ENAMQ9NRM1 1142 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 TREX1Q9NSU2 369 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 PCYOX1Q9UHG3 505 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 CRYL1Q9Y2S2 319 aa13.37□□□□□ -0.27
SLIRP-210ENST00000557431 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF189O75820 626 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 SEC24DO94855 1032 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 RASAL1O95294 804 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 FKBP9O95302 570 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 BMP10O95393 424 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms