RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TARM1B6A8C7 271 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 H7BY64 318 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 CDH16O75309 829 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 STK17BO94768 372 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 KIAA0754O94854 1291 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 WDR47O94967 919 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 CDH1P12830 882 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 NPPBP16860 134 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 KRT15P19012 456 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 SLC6A12P48065 614 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 HSPA7P48741 367 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 HNMTP50135 292 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 ABATP80404 500 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHMT2-225ENST00000556798 SULT1C3Q6IMI6 304 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 ZNF425Q6IV72 752 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 THOC6Q86W42 341 aaKnown RBP16.78■□□□□ 0.28
SHMT2-225ENST00000556798 PAQR7Q86WK9 346 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 PROSER1Q86XN7 944 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 TMEM126BQ8IUX1 230 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 KDF1Q8NAX2 398 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-225ENST00000556798 SNIP1Q8TAD8 396 aaKnown RBP16.78■□□□□ 0.28
SHMT2-225ENST00000556798 RHEBL1Q8TAI7 183 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 CABS1Q96KC9 395 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 PRAP1Q96NZ9 151 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 DCBLD2Q96PD2 775 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 ZPBPQ9BS86 351 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 B3GNT4Q9C0J1 378 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 CHRNA10Q9GZZ6 450 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 SYNPO2LQ9H987 977 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 WDR70Q9NW82 654 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 CPSF2Q9P2I0 782 aaKnown RBP16.78■□□□□ 0.28
SHMT2-225ENST00000556798 XPR1Q9UBH6 696 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 PLCL2Q9UPR0 1127 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 SLC22A14Q9Y267 594 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 ASB1Q9Y576 335 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 KLK4Q9Y5K2 254 aa16.78■□□□□ 0.28
SHMT2-225ENST00000556798 ANKRD11Q6UB99 2663 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-225ENST00000556798 HAT1O14929 419 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 SCRG1O75711 98 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 MT-ND3P03897 115 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 MSL3P1P0C860 447 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 PYGBP11216 843 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 ITGA1P56199 1179 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 NAA25Q14CX7 972 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 TGIF1Q15583 401 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 TSNAXIP1Q2TAA8 658 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 RNF44Q7L0R7 432 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 PLD3Q8IV08 490 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 MCATQ8IVS2 390 aaKnown RBP16.77■□□□□ 0.28
SHMT2-225ENST00000556798 TCAIMQ8N3R3 496 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 ZBTB9Q96C00 473 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 HAUS8Q9BT25 410 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 SPRTNQ9H040 489 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-225ENST00000556798 ANKMY1Q9P2S6 941 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 ACSL6Q9UKU0 697 aa16.77■□□□□ 0.28
SHMT2-225ENST00000556798 SYCE1LA8MT33 242 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 STMND1H3BQB6 276 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 TK2O00142 265 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 OR2B3O76000 313 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 NTRK1P04629 796 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 COL6A2P12110 1019 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 MTHFD2P13995 350 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 CD82P27701 267 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 AGTR2P50052 363 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 RASA2Q15283 850 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 ZC3H12BQ5HYM0 836 aaKnown RBP16.76■□□□□ 0.27
SHMT2-225ENST00000556798 CDKL4Q5MAI5 379 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 FRMPD2BQ6IN97 320 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 BPHLQ86WA6 291 aaPredicted RBP16.76■□□□□ 0.27
SHMT2-225ENST00000556798 GALNT6Q8NCL4 622 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 ZNF248Q8NDW4 579 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 OR8K5Q8NH50 307 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 KCNE4Q8WWG9 221 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 SLC5A11Q8WWX8 675 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 NEIL2Q969S2 332 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 ZFYVE21Q9BQ24 234 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 SERTAD3Q9UJW9 196 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
SHMT2-225ENST00000556798 PILRAQ9UKJ1 303 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 ZMIZ1Q9ULJ6 1067 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 SNX7Q9UNH6 387 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
SHMT2-225ENST00000556798 LOC105369274A0A096LPK9 316 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 LOC102723532A0A0G2JNH3 316 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 E7EQ34 232 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 H3BMH7 237 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 CCNT2O60583 730 aaKnown RBP16.75■□□□□ 0.27
SHMT2-225ENST00000556798 ERLIN1O75477 346 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 IPO13O94829 963 aaKnown RBP16.75■□□□□ 0.27
SHMT2-225ENST00000556798 DLGAP3O95886 979 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 RBP1P09455 135 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 LIPCP11150 499 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 GFAPP14136 432 aa16.75■□□□□ 0.27
SHMT2-225ENST00000556798 GGT5P36269 586 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms