RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SKA2Q8WVK7 121 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-219ENST00000556432 NRGNQ92686 78 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ZNF354BQ96LW1 612 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 SIGLEC12Q96PQ1 595 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 PPP1R2P1Q96PQ5 205 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ZFYVE21Q9BQ24 234 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 TSSK1BQ9BXA7 367 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 ENAMQ9NRM1 1142 aa13.21□□□□□ -0.29
ACTN1-219ENST00000556432 PRRC2AP48634 2157 aaKnown RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 IGHV3-20A0A0C4DH32 117 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 OR1I1O60431 355 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 FAM155BO75949 473 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 APOA4P06727 396 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 KLK2P20151 261 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 CCR7P32248 378 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 IST1P53990 364 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 UBASH3AP57075 661 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 TPM4P67936 248 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 MYBPHQ13203 477 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 TMED2Q15363 201 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 DOLPP1Q86YN1 238 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 TGIF2LYQ8IUE0 185 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 CDKL3Q8IVW4 592 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 OR2L3Q8NG85 312 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 ASZ1Q8WWH4 475 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 FRMD6Q96NE9 622 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 TTC1Q99614 292 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 TREX2Q9BQ50 279 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 KCNK13Q9HB14 408 aa13.2□□□□□ -0.3
ACTN1-219ENST00000556432 PIH1D1Q9NWS0 290 aaKnown RBP13.2□□□□□ -0.3
ACTN1-219ENST00000556432 NKX2-6A6NCS4 301 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 H0YGG7 62 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 APOC4-APOC2K7ER74 178 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 VPS26AO75436 327 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 ZWINTO95229 277 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 APOC2P02655 101 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 ZNF24P17028 368 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 CD96P40200 585 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 BDKRB1P46663 353 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 ARF3P61204 181 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 FASTKQ14296 549 aaKnown RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 GRB7Q14451 532 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 SYT16Q17RD7 645 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 CES4AQ5XG92 561 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 DARS2Q6PI48 645 aaKnown RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 BBS12Q6ZW61 710 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 GALNTL5Q7Z4T8 443 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 AMER3Q8N944 861 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 MDS2Q8NDY4 140 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 MVB12AQ96EY5 273 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 IMMP1LQ96LU5 166 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 SPATA13Q96N96 652 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 DPH7Q9BTV6 452 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 ACAT2Q9BWD1 397 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
ACTN1-219ENST00000556432 TTC7AQ9ULT0 858 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 RUVBL1Q9Y265 456 aaKnown RBP13.19□□□□□ -0.3
ACTN1-219ENST00000556432 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 A0A0A6YYC8 382 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 CCDC162PA2VCL2 907 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 FAM221AA4D161 298 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 KRT87PA6NCN2 255 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 TMEM200CA6NKL6 621 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 I3L1I5 382 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 SUN1O94901 812 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 CMPK1P30085 196 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 FOXN2P32314 431 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 SLC26A3P40879 764 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 EIF3EP60228 445 aaKnown RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 MAT1AQ00266 395 aaKnown RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 NAA25Q14CX7 972 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 MAPKAPK3Q16644 382 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 MEP1AQ16819 746 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 PRTGQ2VWP7 1150 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 TMEM205Q6UW68 189 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 LANCL3Q6ZV70 420 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms