RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 BOCQ9BWV1 1114 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 TBC1D10AQ9BXI6 508 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 C1QTNF3Q9BXJ4 246 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MMADHCQ9H3L0 296 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 KLC4Q9NSK0 619 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 STARD5Q9NSY2 213 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 THAP10Q9P2Z0 257 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CD84Q9UIB8 345 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 PRSS21Q9Y6M0 314 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 LRRK1Q38SD2 2015 aa6.65□□□□□ -1.35
SLIRP-204ENST00000555890 BSNQ9UPA5 3926 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CSPG4Q6UVK1 2322 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 OTOL1A6NHN0 477 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 NCF1BA6NI72 391 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 NCF1CA8MVU1 366 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 E9PBE3 544 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 AZIN1O14977 448 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 GSC2O15499 205 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 FFAR2O15552 330 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 GPR39O43194 453 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 KLHL41O60662 606 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 SKAP2O75563 359 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 C8GP07360 202 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RPS17P08708 135 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 KRT16P08779 473 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ENO2P09104 434 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HIST1H2AGP0C0S8 130 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 MPC1LP0DKB6 136 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ADRB3P13945 408 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 NCF1P14598 390 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 VCLP18206 1134 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HIST1H2ADP20671 130 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 EPHA3P29320 983 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CA5AP35218 305 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PGM1P36871 562 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ETV3P41162 512 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TNFRSF4P43489 277 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 NEK2P51955 445 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 COPAP53621 1224 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 INHBCP55103 352 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CDH13P55290 713 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PKNOX1P55347 436 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 IRX1P78414 480 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 BTKQ06187 659 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RALGDSQ12967 914 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 KLF10Q13118 480 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 BIRC2Q13490 618 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RIPK1Q13546 671 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 MAPRE2Q15555 327 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TGFBIQ15582 683 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RBBP7Q16576 425 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 LSM12Q3MHD2 195 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 POM121L1PQ3SYA9 428 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM52BQ4KMG9 183 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ACSBG2Q5FVE4 666 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CDKL4Q5MAI5 379 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PLEKHS1Q5SXH7 462 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 C6orf163Q5TEZ5 329 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 SULT1C3Q6IMI6 304 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 METTL2BQ6P1Q9 378 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TTC23LQ6PF05 361 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 LIPIQ6XZB0 460 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 SLCO4C1Q6ZQN7 724 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RINLQ6ZS11 566 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RFLNAQ6ZTI6 216 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ERN2Q76MJ5 926 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF765Q7L2R6 523 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PARS2Q7L3T8 475 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TECPR1Q7Z6L1 1165 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RP9Q8TA86 221 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TRPC4APQ8TEL6 797 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF483Q8TF39 744 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 BTN2A2Q8WVV5 523 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ARRDC3Q96B67 414 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 AP2M1Q96CW1 435 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PRR11Q96HE9 360 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HIST1H2AHQ96KK5 128 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 PPP1R36Q96LQ0 422 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 VPS35Q96QK1 796 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 OR52B2Q96RD2 323 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CCT7Q99832 543 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HIST1H2AJQ99878 128 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 EGFL8Q99944 293 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 H2AFJQ9BTM1 129 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HGH1Q9BTY7 390 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 NUSAP1Q9BXS6 441 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 HDAC8Q9BY41 377 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ABCG8Q9H221 673 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 C1orf21Q9H246 121 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM245Q9H330 911 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 WDR55Q9H6Y2 383 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 MEAF6Q9HAF1 191 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 RDH14Q9HBH5 336 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 SEMA4BQ9NPR2 832 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 UTP6Q9NYH9 597 aaKnown RBP6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TAS2R1Q9NYW7 299 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms