RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TAP2Q03519 686 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 KLC1Q07866 573 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 DSG2Q14126 1118 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 TRIP13Q15645 432 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 RBBP7Q16576 425 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ICE2Q659A1 982 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ATG9BQ674R7 924 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 B3GNTL1Q67FW5 361 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 REXO1L1PQ8IX06 675 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ARHGEF39Q8N4T4 335 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 STT3BQ8TCJ2 826 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF669Q96BR6 464 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 OR2A5Q96R48 311 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 EBNA1BP2Q99848 306 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 CCDC68Q9H2F9 335 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 SOX17Q9H6I2 414 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 C14orf105Q9NVL8 296 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 GALPQ9UBC7 116 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 DHRS7Q9Y394 339 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 NBPF19A0A087WUL8 3843 aa12.11□□□□□ -0.47
HNRNPC-221ENST00000555883 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 KRT87PA6NCN2 255 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 H0YGG7 62 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 CES2O00748 559 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 NRP2O60462 931 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 SEMA7AO75326 666 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 MED26O95402 600 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 CYC1P08574 325 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ACPPP15309 386 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 SLC26A3P40879 764 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 TSFMP43897 325 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 VPS41P49754 854 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 MRPL49Q13405 166 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 FAM53BQ14153 422 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF549Q6P9A3 640 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 TMEM151BQ8IW70 566 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 NAT8LQ8N9F0 302 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ACTRT1Q8TDG2 376 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ZNF480Q8WV37 535 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 FAM136AQ96C01 138 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 LMF1Q96S06 567 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 PKP4Q99569 1192 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 EPS8L2Q9H6S3 715 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ZBTB20Q9HC78 741 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 PLEKHB1Q9UF11 243 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 COPG1Q9Y678 874 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 MAU2Q9Y6X3 613 aa12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 RP1L1Q8IWN7 2480 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-221ENST00000555883 UNC79Q9P2D8 2635 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 MAP2K7O14733 419 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 ZBTB14O43829 449 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 KIF5CO60282 957 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 EIF2S1P05198 315 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 FBLP22087 321 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 SLC1A2P43004 574 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 AP2B1P63010 937 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 YBX1P67809 324 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CTBP1Q13363 440 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 RPUSD3Q6P087 351 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 SUSD1Q6UWL2 747 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CYHR1Q6ZMK1 362 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 DENND6AQ8IWF6 608 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 PPIL6Q8IXY8 311 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CISD2Q8N5K1 135 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CSNK1A1LQ8N752 337 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 GABPB2Q8TAK5 448 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CD200R1Q8TD46 325 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 RERGQ96A58 199 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 C19orf60Q96EN9 201 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 SIGLEC10Q96LC7 697 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 SLC30A3Q99726 388 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 TRIM56Q9BRZ2 755 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 ACAT2Q9BWD1 397 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 MKKSQ9NPJ1 570 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms