RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 FBXO48Q5FWF7 155 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PHF19Q5T6S3 580 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 THEMIS2Q5TEJ8 643 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 FBXO42Q6P3S6 717 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 DGLUCYQ7Z3D6 616 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 TRIM73Q86UV7 250 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 BPHLQ86WA6 291 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-219ENST00000555323 C17orf64Q86WR6 236 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 FAM129CQ86XR2 697 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 DNAJC22Q8N4W6 341 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 C19orf47Q8N9M1 422 aaKnown RBP12.19□□□□□ -0.46
SYNE2-219ENST00000555323 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 SLC5A11Q8WWX8 675 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 NEIL2Q969S2 332 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 L3HYPDHQ96EM0 354 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 WDR34Q96EX3 536 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 FAM111AQ96PZ2 611 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PLCD4Q9BRC7 762 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 DPH7Q9BTV6 452 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 ERVK-6Q9BXR3 956 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 ZMYND15Q9H091 742 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 ACBD3Q9H3P7 528 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 EHD1Q9H4M9 534 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 FAM60AQ9NP50 221 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PDE7BQ9NP56 450 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
SYNE2-219ENST00000555323 OPTCQ9UBM4 332 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PILRAQ9UKJ1 303 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PCM1Q15154 2024 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 KCNE1BA0A087WTH5 132 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 CCDC187A0A096LP49 1063 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 B4E171 279 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 H7BY64 318 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 MAP3K7O43318 606 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PRAMEF10O60809 474 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 WFS1O76024 890 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 ZWINTO95229 277 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 RPS17P08708 135 aaKnown RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 EPB42P16452 691 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 EEF1DP29692 281 aaKnown RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 TSPAN7P41732 249 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PIK3CGP48736 1102 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 SEPHS1P49903 392 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 CSNK1G2P78368 415 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 MC2RQ01718 297 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 TSTA3Q13630 321 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PCLAFQ15004 111 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 TBCCQ15814 346 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PDK4Q16654 411 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 UNC50Q53HI1 259 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 ZNF678Q5SXM1 525 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 TMTC4Q5T4D3 741 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 NXPE4Q6UWF7 544 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 RAB11FIP2Q7L804 512 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PAQR7Q86WK9 346 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PRAP1Q96NZ9 151 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 B3GNT4Q9C0J1 378 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PELI2Q9HAT8 420 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 ZBTB26Q9HCK0 441 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 FBXO8Q9NRD0 319 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 AKAP7Q9P0M2 348 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 SH2B3Q9UQQ2 575 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
SYNE2-219ENST00000555323 A0A1W2PNU3 283 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 FAM149AA5PLN7 773 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 LRRC14BA6NHZ5 514 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 HYAL3O43820 417 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 SRPX2O60687 465 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 UGDHO60701 494 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 PRAMEF4O60810 478 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 TRIM13O60858 407 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 CTSVO60911 334 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 KATNA1O75449 491 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ADRB1P08588 477 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 C1GALT1C1LP0DN25 315 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 FGF3P11487 239 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 FOLR1P15328 257 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 CCR8P51685 355 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ACY1Q03154 408 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 IL11RAQ14626 422 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ZC3H12BQ5HYM0 836 aaKnown RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 CATSPEREQ5SY80 951 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 PRAMEF9Q5VWM5 478 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 LIPMQ5VYY2 423 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ATG9BQ674R7 924 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 IGF2-ASQ6U949 168 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms