RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NAA20P61599 178 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 HERVK_113P63132 956 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ACY1Q03154 408 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 RELAQ04206 551 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ASPHQ12797 758 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 FOXC1Q12948 553 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ZC3H12BQ5HYM0 836 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 ZNF425Q6IV72 752 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ADCK2Q7Z695 626 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 SNX31Q8N9S9 440 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ABHD11Q8NFV4 315 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 SREK1Q8WXA9 508 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 NEIL2Q969S2 332 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 PLCD4Q9BRC7 762 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 C12orf65Q9H3J6 166 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 PELI2Q9HAT8 420 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 SLC6A20Q9NP91 592 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 KLHL20Q9Y2M5 609 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 LOXL2Q9Y4K0 774 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 ASB1Q9Y576 335 aa13.73□□□□□ -0.21
CHD8-208ENST00000555301 GOLGA4Q13439 2230 aaKnown RBP13.73□□□□□ -0.21
CHD8-208ENST00000555301 PCNX2A6NKB5 2137 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 IGKV1-8A0A0C4DH67 115 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 OR2A25A4D2G3 310 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 H7BY64 318 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 E2F3O00716 465 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 HYAL3O43820 417 aaPredicted RBP13.72□□□□□ -0.21
CHD8-208ENST00000555301 RPS17P08708 135 aaKnown RBP13.72□□□□□ -0.21
CHD8-208ENST00000555301 MSL3P1P0C860 447 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 CDH1P12830 882 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 ETV4P43268 484 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 CCR8P51685 355 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 DNAJB13P59910 316 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
CHD8-208ENST00000555301 GTF2H2Q13888 395 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 ZIC1Q15915 447 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 TTMPQ5BVD1 217 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 ZNF678Q5SXM1 525 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 LIPMQ5VYY2 423 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 GTF2H2CQ6P1K8 395 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 NXPE4Q6UWF7 544 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 TMPRSS11BQ86T26 416 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 PAQR7Q86WK9 346 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 FAM129CQ86XR2 697 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 TBC1D19Q8N5T2 526 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 TEX9Q8N6V9 391 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 PPP4R1Q8TF05 950 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 L3HYPDHQ96EM0 354 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 PRAP1Q96NZ9 151 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 EHD1Q9H4M9 534 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 CUEDC1Q9NWM3 386 aaPredicted RBP13.72□□□□□ -0.21
CHD8-208ENST00000555301 OXSMQ9NWU1 459 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 PCTPQ9UKL6 214 aa13.72□□□□□ -0.21
CHD8-208ENST00000555301 TMEM120BA0PK00 339 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 EFCAB7A8K855 629 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 B4E171 279 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 E7EQ34 232 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 PLD2O14939 933 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 H2AFYO75367 372 aaKnown RBP13.71□□□□□ -0.21
CHD8-208ENST00000555301 SUPT7LO94864 414 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 JMJD7P0C870 316 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 EBLN1P0CF75 366 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 C1GALT1C1LP0DN25 315 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 EZRP15311 586 aaKnown RBP13.71□□□□□ -0.21
CHD8-208ENST00000555301 CXCR2P25025 360 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 TSPAN7P41732 249 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 CSNK1G2P78368 415 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 MC2RQ01718 297 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 PCDH1Q08174 1060 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 GPS2Q13227 327 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 PCLAFQ15004 111 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 TBCCQ15814 346 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 HSP90B2PQ58FF3 399 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 ATG9BQ674R7 924 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 SLCO4C1Q6ZQN7 724 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 GOLGA7Q7Z5G4 137 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
CHD8-208ENST00000555301 DNAJC22Q8N4W6 341 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 OR4K1Q8NGD4 311 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 N4BP2L2Q92802 583 aaPredicted RBP13.71□□□□□ -0.21
CHD8-208ENST00000555301 TMEM237Q96Q45 408 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 ZFYVE21Q9BQ24 234 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 IPPKQ9H8X2 491 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 FAM60AQ9NP50 221 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 OCIAD1Q9NX40 245 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 SIDT1Q9NXL6 827 aaKnown RBP13.71□□□□□ -0.21
CHD8-208ENST00000555301 NKIRAS1Q9NYS0 192 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 SH2B3Q9UQQ2 575 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 PCDHGA8Q9Y5G5 932 aa13.71□□□□□ -0.21
CHD8-208ENST00000555301 ASXL3Q9C0F0 2248 aa13.71□□□□□ -0.22
CHD8-208ENST00000555301 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms